Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 RNU6-1042P-201ENST00000384204 107 ntBASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 RNU6-43P-201ENST00000384302 107 ntBASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 SNORD116-1-201ENST00000384335 95 ntBASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 BTF3L4P2-201ENST00000392798 346 ntBASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 RPS29P13-201ENST00000402041 169 ntBASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 RNA5SP450-201ENST00000411206 102 ntBASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 AL606489.2-201ENST00000433886 234 ntBASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 IFNA20P-201ENST00000436840 528 ntBASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 MTND3P5-201ENST00000512798 333 ntBASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 COPS8P3-201ENST00000526024 482 ntBASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 MIR4648-201ENST00000580107 72 ntBASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 AL034555.1-201ENST00000604816 211 ntBASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 SNORD98-201ENST00000636377 67 ntBASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.55□□□□□ -2.16
IGHV3-43DP0DP04 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 ZNF702P-202ENST00000434269 1966 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 RNA5SP276-201ENST00000362580 94 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 RNU6-1141P-201ENST00000364520 107 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 SNORD116-2-201ENST00000384274 95 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 SNORD116-6-201ENST00000384711 96 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 MIR29C-201ENST00000385231 88 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 SNORD37.1-201ENST00000390968 65 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 MIR1262-201ENST00000408276 93 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 U3.40-201ENST00000408706 208 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 RNA5SP489-201ENST00000410986 109 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 AC010975.2-201ENST00000427781 588 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 CBX3P6-201ENST00000430257 527 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 VN1R108P-201ENST00000431580 830 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 AL121601.2-201ENST00000438019 707 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 DNAJC19P4-201ENST00000440115 345 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 AC245102.2-201ENST00000448956 180 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 MTCO2P18-201ENST00000457151 658 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 RPS27P21-201ENST00000486977 252 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 AC079804.2-201ENST00000490376 200 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 RN7SL274P-201ENST00000492268 272 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 AC009646.1-201ENST00000510455 318 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 OR11H5P-201ENST00000554039 926 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 MTND1P15-201ENST00000579262 949 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 VN1R107P-201ENST00000601784 209 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 AC018889.1-201ENST00000605372 397 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 RNU6-85P-201ENST00000605989 107 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 AC087241.4-201ENST00000612441 480 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 AC139792.3-201ENST00000623525 224 ntBASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
IGHV3-43DP0DP04 SNORA16.1-201ENST00000364597 132 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 SNORD14D-201ENST00000384390 87 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 RNA5SP219-201ENST00000390940 113 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AL079342.1-201ENST00000401460 267 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 SUMO2P12-201ENST00000405924 140 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AL663109.1-201ENST00000411498 844 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 SRIP3-201ENST00000413200 219 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AL356379.1-201ENST00000414105 126 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AL590135.1-201ENST00000422215 156 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AC096920.1-201ENST00000423991 241 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AC019205.3-201ENST00000424573 156 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AC244670.1-201ENST00000436879 112 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AC016700.2-201ENST00000446011 156 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AC087884.1-201ENST00000469738 328 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AC015911.1-201ENST00000495111 156 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 RPS29P21-201ENST00000496272 170 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AC145146.1-201ENST00000496370 254 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AC022447.4-201ENST00000504053 364 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 CCDC34P1-201ENST00000507441 517 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 PTP4A1P4-201ENST00000512479 322 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 RPL23AP94-201ENST00000512518 302 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 SNORA40.12-201ENST00000516329 111 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AC090115.3-201ENST00000553218 849 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 TRAV32-201ENST00000553993 340 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AP005136.1-201ENST00000579765 429 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 MIR3136-201ENST00000583498 78 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 HULC.1-201ENST00000612720 240 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AL162373.1-201ENST00000620433 407 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 SDR42E1P4-201ENST00000620894 481 ntBASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
IGHV3-43DP0DP04 AP000560.1-201ENST00000624150 1937 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms