Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 AC022254.1-201ENST00000567857 235 ntBASIC1.86□□□□□ -2.11
TGFAP01135 APOOP1-201ENST00000604695 592 ntBASIC1.86□□□□□ -2.11
TGFAP01135 U2.17-201ENST00000611454 95 ntBASIC1.86□□□□□ -2.11
TGFAP01135 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TGFAP01135 MIR6073-201ENST00000352083 89 ntBASIC1.85□□□□□ -2.11
TGFAP01135 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
TGFAP01135 RNU6-552P-201ENST00000362869 119 ntBASIC1.85□□□□□ -2.11
TGFAP01135 SNORA64-201ENST00000384674 134 ntBASIC1.85□□□□□ -2.11
TGFAP01135 RNU6-903P-201ENST00000391270 109 ntBASIC1.85□□□□□ -2.11
TGFAP01135 MTCYBP2-201ENST00000407745 171 ntBASIC1.85□□□□□ -2.11
TGFAP01135 POLHP1-201ENST00000411806 470 ntBASIC1.85□□□□□ -2.11
TGFAP01135 USP9YP27-201ENST00000418455 438 ntBASIC1.85□□□□□ -2.11
TGFAP01135 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.85□□□□□ -2.11
TGFAP01135 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.85□□□□□ -2.11
TGFAP01135 SNAP23P1-201ENST00000433229 246 ntBASIC1.85□□□□□ -2.11
TGFAP01135 AL035666.1-201ENST00000446195 348 ntBASIC1.85□□□□□ -2.11
TGFAP01135 AL031274.1-201ENST00000450334 232 ntBASIC1.85□□□□□ -2.11
TGFAP01135 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.85□□□□□ -2.11
TGFAP01135 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.85□□□□□ -2.11
TGFAP01135 RNU7-63P-201ENST00000459054 62 ntBASIC1.85□□□□□ -2.11
TGFAP01135 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.85□□□□□ -2.11
TGFAP01135 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.85□□□□□ -2.11
TGFAP01135 AP005660.1-201ENST00000522972 293 ntBASIC1.85□□□□□ -2.11
TGFAP01135 AC007834.2-201ENST00000536310 343 ntBASIC1.85□□□□□ -2.11
TGFAP01135 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.85□□□□□ -2.11
TGFAP01135 AGGF1P4-201ENST00000568249 801 ntBASIC1.85□□□□□ -2.11
TGFAP01135 MIR4528-201ENST00000577763 90 ntBASIC1.85□□□□□ -2.11
TGFAP01135 AL353997.5-201ENST00000618886 171 ntBASIC1.85□□□□□ -2.11
TGFAP01135 MIR6132-201ENST00000622083 109 ntBASIC1.85□□□□□ -2.11
TGFAP01135 AC078883.4-201ENST00000623218 367 ntBASIC1.85□□□□□ -2.11
TGFAP01135 MIR219B-201ENST00000637023 88 ntBASIC1.85□□□□□ -2.11
TGFAP01135 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TGFAP01135 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
TGFAP01135 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
TGFAP01135 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TGFAP01135 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
TGFAP01135 CBX3P1-201ENST00000325243 554 ntBASIC1.84□□□□□ -2.11
TGFAP01135 RNA5SP99-201ENST00000364020 114 ntBASIC1.84□□□□□ -2.11
TGFAP01135 SNORD32A-201ENST00000364805 84 ntBASIC1.84□□□□□ -2.11
TGFAP01135 RNU6-26P-201ENST00000383985 107 ntBASIC1.84□□□□□ -2.11
TGFAP01135 SNORD116-8-201ENST00000384365 95 ntBASIC1.84□□□□□ -2.11
TGFAP01135 SNORA67.3-201ENST00000384366 140 ntBASIC1.84□□□□□ -2.11
TGFAP01135 RNU6-348P-201ENST00000384386 107 ntBASIC1.84□□□□□ -2.11
TGFAP01135 SNORA51.11-201ENST00000384442 131 ntBASIC1.84□□□□□ -2.11
TGFAP01135 MIR597-201ENST00000384968 97 ntBASIC1.84□□□□□ -2.11
TGFAP01135 SNORA26.3-201ENST00000391119 136 ntBASIC1.84□□□□□ -2.11
TGFAP01135 AL079342.1-201ENST00000401460 267 ntBASIC1.84□□□□□ -2.11
TGFAP01135 AC009310.1-201ENST00000414414 451 ntBASIC1.84□□□□□ -2.11
TGFAP01135 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.84□□□□□ -2.11
TGFAP01135 AL590135.1-201ENST00000422215 156 ntBASIC1.84□□□□□ -2.11
TGFAP01135 AC019205.3-201ENST00000424573 156 ntBASIC1.84□□□□□ -2.11
TGFAP01135 RPL23AP95-201ENST00000426806 265 ntBASIC1.84□□□□□ -2.11
TGFAP01135 AL133396.1-201ENST00000432048 687 ntBASIC1.84□□□□□ -2.11
TGFAP01135 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.84□□□□□ -2.11
TGFAP01135 USP9YP29-201ENST00000445112 563 ntBASIC1.84□□□□□ -2.11
TGFAP01135 AC016700.2-201ENST00000446011 156 ntBASIC1.84□□□□□ -2.11
TGFAP01135 AL031659.1-201ENST00000447075 539 ntBASIC1.84□□□□□ -2.11
TGFAP01135 AC015911.1-201ENST00000495111 156 ntBASIC1.84□□□□□ -2.11
TGFAP01135 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
TGFAP01135 AK3P2-201ENST00000507976 429 ntBASIC1.84□□□□□ -2.11
TGFAP01135 AC116337.1-201ENST00000509680 687 ntBASIC1.84□□□□□ -2.11
TGFAP01135 AC005741.1-201ENST00000511094 432 ntBASIC1.84□□□□□ -2.11
TGFAP01135 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.84□□□□□ -2.11
TGFAP01135 AC060766.3-201ENST00000591442 263 ntBASIC1.84□□□□□ -2.11
TGFAP01135 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.84□□□□□ -2.11
TGFAP01135 AC130454.1-201ENST00000622948 401 ntBASIC1.84□□□□□ -2.11
TGFAP01135 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.84□□□□□ -2.11
TGFAP01135 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
TGFAP01135 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
TGFAP01135 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.83□□□□□ -2.12
TGFAP01135 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
TGFAP01135 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
TGFAP01135 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
TGFAP01135 RNU6-23P-201ENST00000363283 107 ntBASIC1.83□□□□□ -2.12
TGFAP01135 Y_RNA.159-201ENST00000363674 87 ntBASIC1.83□□□□□ -2.12
TGFAP01135 RNU6-1103P-201ENST00000384150 107 ntBASIC1.83□□□□□ -2.12
TGFAP01135 RNA5SP501-201ENST00000410990 112 ntBASIC1.83□□□□□ -2.12
TGFAP01135 MTCO2P34-201ENST00000421994 607 ntBASIC1.83□□□□□ -2.12
TGFAP01135 RNU6-956P-201ENST00000458868 103 ntBASIC1.83□□□□□ -2.12
TGFAP01135 SNRPGP7-201ENST00000469016 106 ntBASIC1.83□□□□□ -2.12
TGFAP01135 AC016632.1-201ENST00000503994 196 ntBASIC1.83□□□□□ -2.12
TGFAP01135 AC098862.1-201ENST00000504991 413 ntBASIC1.83□□□□□ -2.12
TGFAP01135 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TGFAP01135 RNU6-567P-201ENST00000516746 107 ntBASIC1.83□□□□□ -2.12
TGFAP01135 RNU6-548P-201ENST00000517083 115 ntBASIC1.83□□□□□ -2.12
TGFAP01135 RNA5SP490-201ENST00000517141 136 ntBASIC1.83□□□□□ -2.12
TGFAP01135 HSPE1P4-201ENST00000550617 308 ntBASIC1.83□□□□□ -2.12
TGFAP01135 HIF1AP1-201ENST00000553642 175 ntBASIC1.83□□□□□ -2.12
TGFAP01135 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.83□□□□□ -2.12
TGFAP01135 MIR3923-201ENST00000579521 83 ntBASIC1.83□□□□□ -2.12
TGFAP01135 AC136475.10-201ENST00000620253 385 ntBASIC1.83□□□□□ -2.12
TGFAP01135 AC098657.3-201ENST00000620434 263 ntBASIC1.83□□□□□ -2.12
TGFAP01135 MIR6766-201ENST00000622641 72 ntBASIC1.83□□□□□ -2.12
TGFAP01135 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.83□□□□□ -2.12
TGFAP01135 ZNF72P-201ENST00000425869 1908 ntBASIC1.82□□□□□ -2.12
TGFAP01135 MIR21-201ENST00000362134 72 ntBASIC1.82□□□□□ -2.12
TGFAP01135 RNU6-234P-201ENST00000365229 104 ntBASIC1.82□□□□□ -2.12
TGFAP01135 RNU6-827P-201ENST00000365553 106 ntBASIC1.82□□□□□ -2.12
TGFAP01135 SNORA48.1-201ENST00000390879 135 ntBASIC1.82□□□□□ -2.12
TGFAP01135 RNU2-40P-201ENST00000410833 196 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms