Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
ALDH1A1P00352 AL592182.3-201ENST00000642132 3304 ntBASIC4.77□□□□□ -1.65
ALDH1A1P00352 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ALDH1A1P00352 AL672167.1-204ENST00000641875 3017 ntBASIC4.77□□□□□ -1.65
ALDH1A1P00352 U3.9-201ENST00000363823 204 ntBASIC4.77□□□□□ -1.65
ALDH1A1P00352 U8.6-201ENST00000364939 135 ntBASIC4.77□□□□□ -1.65
ALDH1A1P00352 MIR30B-201ENST00000384850 88 ntBASIC4.77□□□□□ -1.65
ALDH1A1P00352 MIR544A-201ENST00000384855 91 ntBASIC4.77□□□□□ -1.65
ALDH1A1P00352 MIR548A3-201ENST00000385297 97 ntBASIC4.77□□□□□ -1.65
ALDH1A1P00352 MIR1179-201ENST00000408703 91 ntBASIC4.77□□□□□ -1.65
ALDH1A1P00352 RNU4-43P-201ENST00000410628 137 ntBASIC4.77□□□□□ -1.65
ALDH1A1P00352 Z74021.1-201ENST00000423610 407 ntBASIC4.77□□□□□ -1.65
ALDH1A1P00352 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.77□□□□□ -1.65
ALDH1A1P00352 SNRPEP9-201ENST00000436794 238 ntBASIC4.77□□□□□ -1.65
ALDH1A1P00352 RNA5SP103-201ENST00000459503 118 ntBASIC4.77□□□□□ -1.65
ALDH1A1P00352 RPS4XP13-201ENST00000483219 789 ntBASIC4.77□□□□□ -1.65
ALDH1A1P00352 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.77□□□□□ -1.65
ALDH1A1P00352 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.77□□□□□ -1.65
ALDH1A1P00352 AC020895.1-201ENST00000595362 272 ntBASIC4.77□□□□□ -1.65
ALDH1A1P00352 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.77□□□□□ -1.65
ALDH1A1P00352 AC019159.1-201ENST00000605094 187 ntBASIC4.77□□□□□ -1.65
ALDH1A1P00352 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.77□□□□□ -1.65
ALDH1A1P00352 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
ALDH1A1P00352 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ALDH1A1P00352 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.77□□□□□ -1.65
ALDH1A1P00352 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ALDH1A1P00352 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.77□□□□□ -1.65
ALDH1A1P00352 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
ALDH1A1P00352 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
ALDH1A1P00352 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.76□□□□□ -1.65
ALDH1A1P00352 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ALDH1A1P00352 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.76□□□□□ -1.65
ALDH1A1P00352 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ALDH1A1P00352 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ALDH1A1P00352 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ALDH1A1P00352 RNU6-597P-201ENST00000365620 102 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 MIR153-1-201ENST00000384914 90 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
ALDH1A1P00352 SNORA26.3-201ENST00000391119 136 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.76□□□□□ -1.65
ALDH1A1P00352 Z92545.1-201ENST00000411782 234 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 CYCSP49-201ENST00000420810 319 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 AC012306.1-201ENST00000423267 114 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 AC078809.1-201ENST00000427601 140 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 RPL39P29-201ENST00000447779 157 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 AL591473.1-201ENST00000464297 313 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 RN7SL323P-201ENST00000494712 295 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 MLLT10P2-201ENST00000506434 249 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 RNA5SP291-201ENST00000517222 105 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 IGKV2D-19-201ENST00000523346 262 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.76□□□□□ -1.65
ALDH1A1P00352 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.76□□□□□ -1.65
ALDH1A1P00352 AC133485.4-201ENST00000561835 220 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 RPL23AP97-201ENST00000568955 471 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 AC138907.4-201ENST00000570107 226 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 AL160290.3-201ENST00000604869 165 ntBASIC4.76□□□□□ -1.65
ALDH1A1P00352 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.76□□□□□ -1.65
ALDH1A1P00352 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.76□□□□□ -1.65
ALDH1A1P00352 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
ALDH1A1P00352 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ALDH1A1P00352 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ALDH1A1P00352 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.75□□□□□ -1.65
ALDH1A1P00352 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ALDH1A1P00352 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ALDH1A1P00352 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ALDH1A1P00352 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ALDH1A1P00352 AC092268.1-201ENST00000342691 405 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 RNU1-62P-201ENST00000362599 164 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 RNU6-727P-201ENST00000363592 107 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 Y_RNA.368-201ENST00000365547 113 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 MIR183-201ENST00000384958 110 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 MIR549A-201ENST00000385268 96 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 SNORA26.2-201ENST00000390922 122 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 RPL21P17-201ENST00000397467 475 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 YPEL5P1-201ENST00000419731 367 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 RPL27AP8-201ENST00000424277 446 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 HMGN2P31-201ENST00000432430 273 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.75□□□□□ -1.65
ALDH1A1P00352 RNU2-60P-201ENST00000517290 128 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 AC090142.3-201ENST00000519012 385 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 AC006199.1-201ENST00000548728 219 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 AC233702.9-201ENST00000581528 203 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 AC011471.1-201ENST00000585766 187 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 AC004832.5-201ENST00000608677 401 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 AL359198.2-201ENST00000611836 194 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ALDH1A1P00352 AL592437.2-201ENST00000421655 2434 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 AL139811.1-201ENST00000424779 2299 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ALDH1A1P00352 AL136164.4-201ENST00000625013 2135 ntBASIC4.75□□□□□ -1.65
ALDH1A1P00352 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.74□□□□□ -1.65
ALDH1A1P00352 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.74□□□□□ -1.65
ALDH1A1P00352 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
ALDH1A1P00352 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
ALDH1A1P00352 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ALDH1A1P00352 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ALDH1A1P00352 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ALDH1A1P00352 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
ALDH1A1P00352 SNORD115-30-201ENST00000364117 82 ntBASIC4.74□□□□□ -1.65
ALDH1A1P00352 RNU6-1264P-201ENST00000383891 107 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms