Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.72□□□□□ -1.97
DDX58O95786 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.71□□□□□ -1.98
DDX58O95786 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.71□□□□□ -1.98
DDX58O95786 RNU6-428P-201ENST00000362942 107 ntBASIC2.71□□□□□ -1.98
DDX58O95786 RNU6-1210P-201ENST00000363775 107 ntBASIC2.71□□□□□ -1.98
DDX58O95786 RNY3P3-201ENST00000363816 102 ntBASIC2.71□□□□□ -1.98
DDX58O95786 RNU6-827P-201ENST00000365553 106 ntBASIC2.71□□□□□ -1.98
DDX58O95786 RNU6-877P-201ENST00000383868 107 ntBASIC2.71□□□□□ -1.98
DDX58O95786 RNU6-293P-201ENST00000411259 106 ntBASIC2.71□□□□□ -1.98
DDX58O95786 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.71□□□□□ -1.98
DDX58O95786 FCF1P9-201ENST00000412546 282 ntBASIC2.71□□□□□ -1.98
DDX58O95786 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.71□□□□□ -1.98
DDX58O95786 ERLEC1P1-201ENST00000433806 578 ntBASIC2.71□□□□□ -1.98
DDX58O95786 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.71□□□□□ -1.98
DDX58O95786 AP000852.1-201ENST00000472460 573 ntBASIC2.71□□□□□ -1.98
DDX58O95786 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.71□□□□□ -1.98
DDX58O95786 RPL38P4-201ENST00000502376 214 ntBASIC2.71□□□□□ -1.98
DDX58O95786 SNORA31.15-201ENST00000516771 132 ntBASIC2.71□□□□□ -1.98
DDX58O95786 AP000763.2-201ENST00000540641 163 ntBASIC2.71□□□□□ -1.98
DDX58O95786 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.71□□□□□ -1.98
DDX58O95786 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.71□□□□□ -1.98
DDX58O95786 AC093249.1-201ENST00000567049 203 ntBASIC2.71□□□□□ -1.98
DDX58O95786 AL713866.2-201ENST00000603579 219 ntBASIC2.71□□□□□ -1.98
DDX58O95786 RNU6-89P-201ENST00000606519 100 ntBASIC2.71□□□□□ -1.98
DDX58O95786 U4atac.1-201ENST00000618345 95 ntBASIC2.71□□□□□ -1.98
DDX58O95786 AC103705.1-201ENST00000619013 241 ntBASIC2.71□□□□□ -1.98
DDX58O95786 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.71□□□□□ -1.98
DDX58O95786 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.7□□□□□ -1.98
DDX58O95786 RNA5SP432-201ENST00000362480 116 ntBASIC2.7□□□□□ -1.98
DDX58O95786 RNA5SP393-201ENST00000363423 117 ntBASIC2.7□□□□□ -1.98
DDX58O95786 RNU6-105P-201ENST00000363909 104 ntBASIC2.7□□□□□ -1.98
DDX58O95786 RNU1-138P-201ENST00000384093 164 ntBASIC2.7□□□□□ -1.98
DDX58O95786 SNORA67.3-201ENST00000384366 140 ntBASIC2.7□□□□□ -1.98
DDX58O95786 MIR561-201ENST00000385216 97 ntBASIC2.7□□□□□ -1.98
DDX58O95786 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
DDX58O95786 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
DDX58O95786 AL079342.1-201ENST00000401460 267 ntBASIC2.7□□□□□ -1.98
DDX58O95786 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.7□□□□□ -1.98
DDX58O95786 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.7□□□□□ -1.98
DDX58O95786 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
DDX58O95786 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.7□□□□□ -1.98
DDX58O95786 AC009238.1-201ENST00000442165 424 ntBASIC2.7□□□□□ -1.98
DDX58O95786 AC009237.6-201ENST00000446969 424 ntBASIC2.7□□□□□ -1.98
DDX58O95786 RNU7-138P-201ENST00000459479 64 ntBASIC2.7□□□□□ -1.98
DDX58O95786 RNU6-1208P-201ENST00000459588 107 ntBASIC2.7□□□□□ -1.98
DDX58O95786 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.7□□□□□ -1.98
DDX58O95786 AC083904.1-201ENST00000487828 231 ntBASIC2.7□□□□□ -1.98
DDX58O95786 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.7□□□□□ -1.98
DDX58O95786 SNORA19.2-201ENST00000516013 114 ntBASIC2.7□□□□□ -1.98
DDX58O95786 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.7□□□□□ -1.98
DDX58O95786 AC103996.1-201ENST00000555468 102 ntBASIC2.7□□□□□ -1.98
DDX58O95786 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.7□□□□□ -1.98
DDX58O95786 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.7□□□□□ -1.98
DDX58O95786 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.7□□□□□ -1.98
DDX58O95786 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
DDX58O95786 MIRLET7G-201ENST00000362280 84 ntBASIC2.69□□□□□ -1.98
DDX58O95786 SNORD114-1-201ENST00000362705 72 ntBASIC2.69□□□□□ -1.98
DDX58O95786 Y_RNA.295-201ENST00000364918 102 ntBASIC2.69□□□□□ -1.98
DDX58O95786 RNU1-52P-201ENST00000384190 164 ntBASIC2.69□□□□□ -1.98
DDX58O95786 MIR524-201ENST00000385242 87 ntBASIC2.69□□□□□ -1.98
DDX58O95786 AL023284.1-201ENST00000403956 276 ntBASIC2.69□□□□□ -1.98
DDX58O95786 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.69□□□□□ -1.98
DDX58O95786 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.69□□□□□ -1.98
DDX58O95786 USP9YP18-201ENST00000425912 695 ntBASIC2.69□□□□□ -1.98
DDX58O95786 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.69□□□□□ -1.98
DDX58O95786 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.69□□□□□ -1.98
DDX58O95786 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.69□□□□□ -1.98
DDX58O95786 RNU1-104P-201ENST00000517280 175 ntBASIC2.69□□□□□ -1.98
DDX58O95786 AC080078.2-201ENST00000603766 501 ntBASIC2.69□□□□□ -1.98
DDX58O95786 AL049779.4-201ENST00000604500 156 ntBASIC2.69□□□□□ -1.98
DDX58O95786 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.68□□□□□ -1.98
DDX58O95786 RNU6-451P-201ENST00000362921 107 ntBASIC2.68□□□□□ -1.98
DDX58O95786 RNU1-72P-201ENST00000362976 153 ntBASIC2.68□□□□□ -1.98
DDX58O95786 RNU6-336P-201ENST00000364891 107 ntBASIC2.68□□□□□ -1.98
DDX58O95786 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
DDX58O95786 MIR514A2-201ENST00000385131 88 ntBASIC2.68□□□□□ -1.98
DDX58O95786 MIR514A3-201ENST00000385132 88 ntBASIC2.68□□□□□ -1.98
DDX58O95786 SNORD73A-201ENST00000386062 65 ntBASIC2.68□□□□□ -1.98
DDX58O95786 EIF4E2P1-201ENST00000393781 255 ntBASIC2.68□□□□□ -1.98
DDX58O95786 Y_RNA.615-201ENST00000410769 117 ntBASIC2.68□□□□□ -1.98
DDX58O95786 AL590556.1-201ENST00000423231 483 ntBASIC2.68□□□□□ -1.98
DDX58O95786 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.68□□□□□ -1.98
DDX58O95786 AC007969.2-201ENST00000441891 191 ntBASIC2.68□□□□□ -1.98
DDX58O95786 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.68□□□□□ -1.98
DDX58O95786 UBL5P3-201ENST00000475112 231 ntBASIC2.68□□□□□ -1.98
DDX58O95786 AL121594.1-201ENST00000475906 575 ntBASIC2.68□□□□□ -1.98
DDX58O95786 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.68□□□□□ -1.98
DDX58O95786 AC087854.1-201ENST00000519706 414 ntBASIC2.68□□□□□ -1.98
DDX58O95786 AC025423.5-201ENST00000550230 219 ntBASIC2.68□□□□□ -1.98
DDX58O95786 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.68□□□□□ -1.98
DDX58O95786 MIR3126-201ENST00000577443 74 ntBASIC2.68□□□□□ -1.98
DDX58O95786 AC024614.3-201ENST00000637860 256 ntBASIC2.68□□□□□ -1.98
DDX58O95786 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
DDX58O95786 Y_RNA.89-201ENST00000363031 102 ntBASIC2.67□□□□□ -1.98
DDX58O95786 SNORA67.1-201ENST00000364749 141 ntBASIC2.67□□□□□ -1.98
DDX58O95786 RNU6-1222P-201ENST00000384615 107 ntBASIC2.67□□□□□ -1.98
DDX58O95786 RNU6-332P-201ENST00000391193 108 ntBASIC2.67□□□□□ -1.98
DDX58O95786 AIMP1P2-201ENST00000425294 312 ntBASIC2.67□□□□□ -1.98
DDX58O95786 UBE2V1P8-201ENST00000437166 265 ntBASIC2.67□□□□□ -1.98
DDX58O95786 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms