Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 AC105137.2-201ENST00000569073 466 ntBASIC3.43□□□□□ -1.86
PAX4O43316 AC053481.4-201ENST00000583164 216 ntBASIC3.43□□□□□ -1.86
PAX4O43316 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.43□□□□□ -1.86
PAX4O43316 AC007546.2-201ENST00000623996 360 ntBASIC3.43□□□□□ -1.86
PAX4O43316 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PAX4O43316 INTS6P1-201ENST00000504674 2530 ntBASIC3.43□□□□□ -1.86
PAX4O43316 AL672167.1-205ENST00000641112 3080 ntBASIC3.42□□□□□ -1.86
PAX4O43316 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.42□□□□□ -1.86
PAX4O43316 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.42□□□□□ -1.86
PAX4O43316 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.42□□□□□ -1.86
PAX4O43316 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 RNU6-1099P-201ENST00000363533 107 ntBASIC3.42□□□□□ -1.86
PAX4O43316 RNU6-146P-201ENST00000384602 108 ntBASIC3.42□□□□□ -1.86
PAX4O43316 Y_RNA.611-201ENST00000410682 108 ntBASIC3.42□□□□□ -1.86
PAX4O43316 Y_RNA.620-201ENST00000411009 88 ntBASIC3.42□□□□□ -1.86
PAX4O43316 RNU6-1245P-201ENST00000411130 106 ntBASIC3.42□□□□□ -1.86
PAX4O43316 AC114755.2-201ENST00000413520 361 ntBASIC3.42□□□□□ -1.86
PAX4O43316 AC007919.1-201ENST00000429380 217 ntBASIC3.42□□□□□ -1.86
PAX4O43316 AURKAPS2-201ENST00000454983 333 ntBASIC3.42□□□□□ -1.86
PAX4O43316 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.42□□□□□ -1.86
PAX4O43316 RNU6-437P-201ENST00000459408 95 ntBASIC3.42□□□□□ -1.86
PAX4O43316 RPS17P2-201ENST00000461663 408 ntBASIC3.42□□□□□ -1.86
PAX4O43316 RPL23AP14-201ENST00000468281 468 ntBASIC3.42□□□□□ -1.86
PAX4O43316 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.42□□□□□ -1.86
PAX4O43316 AC114801.3-201ENST00000510231 177 ntBASIC3.42□□□□□ -1.86
PAX4O43316 RNA5SP153-201ENST00000516498 76 ntBASIC3.42□□□□□ -1.86
PAX4O43316 RNU6-709P-201ENST00000517257 104 ntBASIC3.42□□□□□ -1.86
PAX4O43316 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.42□□□□□ -1.86
PAX4O43316 AP004607.1-201ENST00000524456 203 ntBASIC3.42□□□□□ -1.86
PAX4O43316 AC074050.1-201ENST00000563247 211 ntBASIC3.42□□□□□ -1.86
PAX4O43316 MIR3129-201ENST00000581095 76 ntBASIC3.42□□□□□ -1.86
PAX4O43316 AL121932.1-201ENST00000605542 214 ntBASIC3.42□□□□□ -1.86
PAX4O43316 MIR7155-201ENST00000615925 56 ntBASIC3.42□□□□□ -1.86
PAX4O43316 MIR8069-1-201ENST00000616627 86 ntBASIC3.42□□□□□ -1.86
PAX4O43316 MIR8069-2-201ENST00000621412 86 ntBASIC3.42□□□□□ -1.86
PAX4O43316 AC027309.3-201ENST00000623419 351 ntBASIC3.42□□□□□ -1.86
PAX4O43316 U6.99-201ENST00000637524 83 ntBASIC3.42□□□□□ -1.86
PAX4O43316 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
PAX4O43316 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.42□□□□□ -1.86
PAX4O43316 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.42□□□□□ -1.86
PAX4O43316 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.42□□□□□ -1.86
PAX4O43316 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC3.42□□□□□ -1.86
PAX4O43316 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PAX4O43316 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.41□□□□□ -1.86
PAX4O43316 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.41□□□□□ -1.86
PAX4O43316 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PAX4O43316 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PAX4O43316 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.41□□□□□ -1.86
PAX4O43316 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PAX4O43316 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PAX4O43316 RNU6-1141P-201ENST00000364520 107 ntBASIC3.41□□□□□ -1.86
PAX4O43316 Y_RNA.316-201ENST00000365118 111 ntBASIC3.41□□□□□ -1.86
PAX4O43316 Y_RNA.426-201ENST00000384068 113 ntBASIC3.41□□□□□ -1.86
PAX4O43316 SNORD116-22-201ENST00000384430 92 ntBASIC3.41□□□□□ -1.86
PAX4O43316 MIR518C-201ENST00000384822 101 ntBASIC3.41□□□□□ -1.86
PAX4O43316 RN7SKP27-201ENST00000410684 333 ntBASIC3.41□□□□□ -1.86
PAX4O43316 COX6B1P1-201ENST00000415962 213 ntBASIC3.41□□□□□ -1.86
PAX4O43316 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.41□□□□□ -1.86
PAX4O43316 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.41□□□□□ -1.86
PAX4O43316 AC244670.1-201ENST00000436879 112 ntBASIC3.41□□□□□ -1.86
PAX4O43316 RPL39P25-201ENST00000449384 154 ntBASIC3.41□□□□□ -1.86
PAX4O43316 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PAX4O43316 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PAX4O43316 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.41□□□□□ -1.86
PAX4O43316 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.41□□□□□ -1.86
PAX4O43316 RN7SL329P-201ENST00000467740 299 ntBASIC3.41□□□□□ -1.86
PAX4O43316 AC007686.1-201ENST00000488511 463 ntBASIC3.41□□□□□ -1.86
PAX4O43316 RPL23AP54-201ENST00000495129 419 ntBASIC3.41□□□□□ -1.86
PAX4O43316 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.41□□□□□ -1.86
PAX4O43316 AP001781.1-201ENST00000530977 207 ntBASIC3.41□□□□□ -1.86
PAX4O43316 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.41□□□□□ -1.86
PAX4O43316 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.41□□□□□ -1.86
PAX4O43316 CYCSP40-201ENST00000575927 294 ntBASIC3.41□□□□□ -1.86
PAX4O43316 AL355812.1-201ENST00000603215 216 ntBASIC3.41□□□□□ -1.86
PAX4O43316 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.41□□□□□ -1.86
PAX4O43316 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PAX4O43316 MIR6715B-201ENST00000637172 77 ntBASIC3.41□□□□□ -1.86
PAX4O43316 AC091304.10-201ENST00000641554 121 ntBASIC3.41□□□□□ -1.86
PAX4O43316 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PAX4O43316 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PAX4O43316 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.41□□□□□ -1.86
PAX4O43316 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.41□□□□□ -1.86
PAX4O43316 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PAX4O43316 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.41□□□□□ -1.86
PAX4O43316 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms