Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.52□□□□□ -1.85
FOXN1O15353 AL159169.1-201ENST00000421119 127 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 AC004866.2-201ENST00000438285 481 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 DAP3P1-201ENST00000441522 278 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.52□□□□□ -1.85
FOXN1O15353 AL360271.2-201ENST00000447710 161 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.52□□□□□ -1.85
FOXN1O15353 AC146507.2-201ENST00000460608 476 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 AP000873.1-201ENST00000463987 400 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.52□□□□□ -1.85
FOXN1O15353 RPL31P13-201ENST00000484151 370 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
FOXN1O15353 AC113155.1-201ENST00000511141 769 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 AC109329.1-201ENST00000518744 317 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.52□□□□□ -1.85
FOXN1O15353 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.52□□□□□ -1.85
FOXN1O15353 AC130289.1-201ENST00000577321 73 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.52□□□□□ -1.85
FOXN1O15353 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
FOXN1O15353 MIR5692A1-201ENST00000580523 69 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 OR1M4P-201ENST00000589199 287 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 AC073410.2-201ENST00000603240 332 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 AC009779.6-201ENST00000603972 165 ntBASIC3.52□□□□□ -1.85
FOXN1O15353 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.52□□□□□ -1.85
FOXN1O15353 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
FOXN1O15353 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
FOXN1O15353 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.51□□□□□ -1.85
FOXN1O15353 RNU6-1249P-201ENST00000363237 111 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 Y_RNA.269-201ENST00000364685 89 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
FOXN1O15353 SNORA46-201ENST00000384762 135 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 RNU2-33P-201ENST00000410344 192 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 MTATP6P29-201ENST00000415057 132 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 AC090774.1-201ENST00000435925 246 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 AL139109.1-201ENST00000455491 297 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 RNU6-953P-201ENST00000459154 107 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 ACA59.1-201ENST00000515966 143 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.51□□□□□ -1.85
FOXN1O15353 AC144568.1-201ENST00000520139 137 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 OR4H12P-201ENST00000556269 907 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 RPS29P30-201ENST00000600975 111 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 AC012669.1-201ENST00000603209 283 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 AL390123.1-201ENST00000603216 237 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 MIR3976-201ENST00000606807 139 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 AC006023.2-201ENST00000609916 167 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 AP001282.2-201ENST00000616149 309 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
FOXN1O15353 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
FOXN1O15353 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
FOXN1O15353 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
FOXN1O15353 AC091564.4-201ENST00000533934 2194 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
FOXN1O15353 OR4G2P-202ENST00000641004 1759 ntBASIC3.51□□□□□ -1.85
FOXN1O15353 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
FOXN1O15353 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
FOXN1O15353 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
FOXN1O15353 RNU6-335P-201ENST00000364563 113 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 RNU6-708P-201ENST00000384217 107 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 Y_RNA.508-201ENST00000384502 114 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 Y_RNA.533-201ENST00000384596 114 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 RNU6-130P-201ENST00000411112 103 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 AL592148.1-201ENST00000413568 445 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 CYCSP33-201ENST00000414485 327 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 MTCO3P19-201ENST00000415864 321 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 SSXP9-201ENST00000417503 292 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 PPP1R11P2-201ENST00000423543 382 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 UBE2D3P2-201ENST00000424409 445 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 NDUFB1P2-201ENST00000449477 176 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 HMGN2P13-201ENST00000476476 274 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 RN7SL20P-201ENST00000488827 297 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 SNORA31.3-201ENST00000516029 96 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 Y_RNA.700-201ENST00000516806 100 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.5□□□□□ -1.85
FOXN1O15353 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.5□□□□□ -1.85
FOXN1O15353 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.5□□□□□ -1.85
FOXN1O15353 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.5□□□□□ -1.85
FOXN1O15353 AC004584.2-201ENST00000570407 410 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 AC004792.1-201ENST00000614523 137 ntBASIC3.5□□□□□ -1.85
FOXN1O15353 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
FOXN1O15353 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
FOXN1O15353 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
FOXN1O15353 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
FOXN1O15353 AL355596.1-201ENST00000565399 3996 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 Y_RNA.84-201ENST00000363011 104 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 Y_RNA.183-201ENST00000363882 113 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 RNU6-611P-201ENST00000384276 104 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 MIR215-201ENST00000384858 110 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 RNU6-817P-201ENST00000391083 104 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 SAR1AP2-201ENST00000392696 594 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 MIR548H3-201ENST00000408771 118 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 RNU6-712P-201ENST00000410558 100 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 RNU6-1203P-201ENST00000410703 110 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 RNU2-25P-201ENST00000411041 191 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 RN7SKP192-201ENST00000411291 327 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 AP000275.1-201ENST00000411943 390 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 EI24P1-201ENST00000416584 867 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 AC092423.1-201ENST00000430165 186 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 AC004383.1-201ENST00000438135 289 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 RPS3P1-201ENST00000456781 192 ntBASIC3.49□□□□□ -1.85
FOXN1O15353 CKS1BP2-201ENST00000497342 240 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms