Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.99□□□□□ -2.09
SLC28A1O00337 AC107401.1-201ENST00000503426 685 ntBASIC1.99□□□□□ -2.09
SLC28A1O00337 SNORA14.1-201ENST00000516113 141 ntBASIC1.99□□□□□ -2.09
SLC28A1O00337 RNU6-189P-201ENST00000516120 101 ntBASIC1.99□□□□□ -2.09
SLC28A1O00337 CENPUP1-201ENST00000526649 1202 ntBASIC1.99□□□□□ -2.09
SLC28A1O00337 HSPE1P4-201ENST00000550617 308 ntBASIC1.99□□□□□ -2.09
SLC28A1O00337 AL356157.2-201ENST00000605122 111 ntBASIC1.99□□□□□ -2.09
SLC28A1O00337 AC009090.3-201ENST00000616553 565 ntBASIC1.99□□□□□ -2.09
SLC28A1O00337 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.99□□□□□ -2.09
SLC28A1O00337 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.99□□□□□ -2.09
SLC28A1O00337 RNU6-1159P-201ENST00000362933 107 ntBASIC1.98□□□□□ -2.09
SLC28A1O00337 RNU6-82P-201ENST00000363970 107 ntBASIC1.98□□□□□ -2.09
SLC28A1O00337 RNA5SP138-201ENST00000365098 114 ntBASIC1.98□□□□□ -2.09
SLC28A1O00337 RNU4-66P-201ENST00000365199 138 ntBASIC1.98□□□□□ -2.09
SLC28A1O00337 MIR518A2-201ENST00000384966 87 ntBASIC1.98□□□□□ -2.09
SLC28A1O00337 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SLC28A1O00337 AC078809.1-201ENST00000427601 140 ntBASIC1.98□□□□□ -2.09
SLC28A1O00337 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.98□□□□□ -2.09
SLC28A1O00337 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.98□□□□□ -2.09
SLC28A1O00337 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.98□□□□□ -2.09
SLC28A1O00337 AC245102.2-201ENST00000448956 180 ntBASIC1.98□□□□□ -2.09
SLC28A1O00337 PSPHP1-201ENST00000450062 261 ntBASIC1.98□□□□□ -2.09
SLC28A1O00337 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.98□□□□□ -2.09
SLC28A1O00337 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.98□□□□□ -2.09
SLC28A1O00337 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.98□□□□□ -2.09
SLC28A1O00337 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.98□□□□□ -2.09
SLC28A1O00337 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.98□□□□□ -2.09
SLC28A1O00337 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.98□□□□□ -2.09
SLC28A1O00337 AC092747.3-201ENST00000603769 301 ntBASIC1.98□□□□□ -2.09
SLC28A1O00337 AC068792.1-201ENST00000621354 417 ntBASIC1.98□□□□□ -2.09
SLC28A1O00337 AC124864.2-201ENST00000624736 186 ntBASIC1.98□□□□□ -2.09
SLC28A1O00337 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.97□□□□□ -2.09
SLC28A1O00337 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SLC28A1O00337 SNORD115-3-201ENST00000363100 82 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 RNU6-743P-201ENST00000364151 106 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 RNU4-56P-201ENST00000364700 142 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 SNORD32A-201ENST00000364805 84 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 RNU6-142P-201ENST00000384019 107 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 MIR29C-201ENST00000385231 88 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 BTF3L4P2-201ENST00000392798 346 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 RN7SKP61-201ENST00000410642 295 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 POLHP1-201ENST00000411806 470 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 AL135786.1-201ENST00000415892 214 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.97□□□□□ -2.09
SLC28A1O00337 AL590135.1-201ENST00000422215 156 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 AC019205.3-201ENST00000424573 156 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.97□□□□□ -2.09
SLC28A1O00337 DNAJC19P4-201ENST00000440115 345 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 AC016700.2-201ENST00000446011 156 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 RPL9P6-201ENST00000492764 598 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 AC015911.1-201ENST00000495111 156 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 AC145146.1-201ENST00000496370 254 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 AC009646.1-201ENST00000510455 318 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 RNU6-1038P-201ENST00000516516 104 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.97□□□□□ -2.09
SLC28A1O00337 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.97□□□□□ -2.09
SLC28A1O00337 TRAV32-201ENST00000553993 340 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.97□□□□□ -2.09
SLC28A1O00337 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 AL359880.1-201ENST00000621879 266 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 IGHVIII-44-202ENST00000636235 289 ntBASIC1.97□□□□□ -2.09
SLC28A1O00337 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.97□□□□□ -2.09
SLC28A1O00337 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.97□□□□□ -2.09
SLC28A1O00337 AC092268.1-201ENST00000342691 405 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 RNU4-15P-201ENST00000362613 141 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 RNU6-38P-201ENST00000384085 107 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 SNORD14D-201ENST00000384390 87 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 MIR17-201ENST00000385012 84 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 SNORD73A-201ENST00000386062 65 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 MIR1294-201ENST00000408503 142 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 U3.40-201ENST00000408706 208 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 SRIP3-201ENST00000413200 219 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.96□□□□□ -2.1
SLC28A1O00337 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.96□□□□□ -2.1
SLC28A1O00337 AL356320.1-201ENST00000429616 163 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.96□□□□□ -2.1
SLC28A1O00337 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.96□□□□□ -2.1
SLC28A1O00337 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.96□□□□□ -2.1
SLC28A1O00337 RNU6-333P-201ENST00000459117 107 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 RPL21P99-201ENST00000480369 423 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 AC016632.1-201ENST00000503994 196 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 AC008413.1-201ENST00000511864 177 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 PTP4A1P4-201ENST00000512479 322 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 SNORA31.16-201ENST00000516773 139 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.96□□□□□ -2.1
SLC28A1O00337 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.96□□□□□ -2.1
SLC28A1O00337 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.96□□□□□ -2.1
SLC28A1O00337 AC103705.1-201ENST00000619013 241 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 DUXAP9-208ENST00000622815 614 ntBASIC1.96□□□□□ -2.1
SLC28A1O00337 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SLC28A1O00337 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SLC28A1O00337 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SLC28A1O00337 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.95□□□□□ -2.1
SLC28A1O00337 Y_RNA.194-201ENST00000363985 102 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 CALM2P3-201ENST00000400429 449 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 MIR1262-201ENST00000408276 93 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 RNA5SP338-201ENST00000410495 85 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 RNA5SP450-201ENST00000411206 102 ntBASIC1.95□□□□□ -2.1
SLC28A1O00337 RPL23AP95-201ENST00000426806 265 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms