Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 RNU6-789P-201ENST00000517105 102 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 MIR5695-201ENST00000579717 85 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 HMGN2P15-201ENST00000585707 270 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 AL136164.4-201ENST00000625013 2135 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 RNA5SP197-201ENST00000363357 119 ntBASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 U1.1-201ENST00000384101 164 ntBASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 RNU6-198P-201ENST00000384258 104 ntBASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 RNU6-622P-201ENST00000384272 103 ntBASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 RNU6-378P-201ENST00000384324 107 ntBASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 RNU6-21P-201ENST00000384710 107 ntBASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 Y_RNA.570-201ENST00000384750 101 ntBASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 RPS15AP5-201ENST00000436276 388 ntBASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 RPL39P29-201ENST00000447779 157 ntBASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 AL133162.1-201ENST00000463228 453 ntBASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 RNU6-567P-201ENST00000516746 107 ntBASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 UBL5P4-201ENST00000562584 236 ntBASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 AC090897.2-201ENST00000581715 130 ntBASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
UPK3BL1B0FP48 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 MIR411-201ENST00000362239 96 ntBASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 Y_RNA.76-201ENST00000362931 109 ntBASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 RNU6-1001P-201ENST00000411265 100 ntBASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 AC012306.1-201ENST00000423267 114 ntBASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 PTGES3P4-201ENST00000426243 356 ntBASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 RNU7-120P-201ENST00000459334 63 ntBASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 SNRPGP7-201ENST00000469016 106 ntBASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 SNRPGP3-201ENST00000469405 227 ntBASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 RNU7-110P-201ENST00000516891 62 ntBASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 AC115990.1-201ENST00000526957 301 ntBASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 AL162424.1-201ENST00000602325 221 ntBASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 Z83818.1-201ENST00000603584 150 ntBASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 AL359198.2-201ENST00000611836 194 ntBASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 AL035425.3-201ENST00000564206 4996 ntBASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.87□□□□□ -1.79
UPK3BL1B0FP48 AC058791.1-201ENST00000608412 3198 ntBASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 OTUD4P1-201ENST00000237841 3067 ntBASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 Y_RNA.286-201ENST00000364813 102 ntBASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 RNY4P28-201ENST00000365281 93 ntBASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 RNU6-20P-201ENST00000384106 107 ntBASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 RNU6-748P-201ENST00000384648 107 ntBASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 RNA5SP38-201ENST00000410750 119 ntBASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 AL139247.1-201ENST00000422768 325 ntBASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 AL591419.1-201ENST00000427423 339 ntBASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 AC010099.1-201ENST00000455434 375 ntBASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 RNA5SP164-201ENST00000516533 110 ntBASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 SCARNA14-201ENST00000516903 136 ntBASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 MIR5187-201ENST00000583479 76 ntBASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 IPO8P1-201ENST00000455509 3109 ntBASIC3.86□□□□□ -1.79
UPK3BL1B0FP48 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 AC002543.1-201ENST00000299783 1954 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 UBE3AP2-201ENST00000429033 2259 ntBASIC3.85□□□□□ -1.79
UPK3BL1B0FP48 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms