Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU6-155P-201ENST00000516347 100 ntBASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 RNU6-966P-201ENST00000516479 104 ntBASIC4.96□□□□□ -1.62
ZC3H4Q9UPT8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 LINC01355-201ENST00000566551 5444 ntBASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 Y_RNA.7-201ENST00000362352 102 ntBASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 Y_RNA.498-201ENST00000384460 102 ntBASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 Y_RNA.568-201ENST00000384742 113 ntBASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 FTH1P15-201ENST00000406984 280 ntBASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 AC112220.1-201ENST00000434628 355 ntBASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 VWA8P1-201ENST00000510889 176 ntBASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 AC100770.1-201ENST00000532310 322 ntBASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 AC018448.1-201ENST00000552843 316 ntBASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 AC021231.3-201ENST00000558497 370 ntBASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 MIR6868-201ENST00000611215 58 ntBASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 MIR3651-201ENST00000630427 90 ntBASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.95□□□□□ -1.62
ZC3H4Q9UPT8 AC110491.1-201ENST00000562191 2010 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 MTND5P35-201ENST00000557537 1720 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 SRP72P2-201ENST00000344851 1979 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 RNU6-778P-201ENST00000363269 103 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 RNA5SP197-201ENST00000363357 119 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 RNU5F-3P-201ENST00000363767 117 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 SNORD115-8-201ENST00000363856 82 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 Y_RNA.182-201ENST00000363880 111 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 RNU6-884P-201ENST00000363889 107 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 SNORD115-38-201ENST00000365037 82 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 AC006011.1-201ENST00000442758 349 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 HMGN2P16-201ENST00000456802 261 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 AL121594.1-201ENST00000475906 575 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 AC106707.2-201ENST00000484182 374 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 RNA5SP54-201ENST00000516951 92 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 AL133393.1-201ENST00000603277 287 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 AL365222.1-201ENST00000614661 98 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 AC091932.3-201ENST00000624223 323 ntBASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
ZC3H4Q9UPT8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 Y_RNA.101-201ENST00000363154 102 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 RNU6-1285P-201ENST00000363480 105 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 Y_RNA.179-201ENST00000363844 90 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 Y_RNA.215-201ENST00000364204 112 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 Y_RNA.238-201ENST00000364441 102 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 RNU6-1280P-201ENST00000365211 107 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 MIR549A-201ENST00000385268 96 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 RAB28P5-201ENST00000427490 651 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 AC244670.1-201ENST00000436879 112 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 SEPT7P4-201ENST00000437076 306 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 RNU6-426P-201ENST00000516464 97 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 AC233702.2-202ENST00000562547 291 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 DEFB117-201ENST00000602356 141 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 AL160290.3-201ENST00000604869 165 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 AL008718.3-201ENST00000610217 321 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 AC004467.1-201ENST00000615678 330 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 U2.21-201ENST00000637295 81 ntBASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.93□□□□□ -1.62
ZC3H4Q9UPT8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 AL109809.4-201ENST00000603520 2185 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 AC087190.4-201ENST00000574616 8334 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 AC092268.1-201ENST00000342691 405 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 RNA5SP295-201ENST00000362655 121 ntBASIC4.92□□□□□ -1.62
ZC3H4Q9UPT8 RNU6-1272P-201ENST00000362776 107 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms