Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AC243829.7-201ENST00000633081 225 ntBASIC3.95□□□□□ -1.78
USP35Q9P2H5 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
USP35Q9P2H5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP35Q9P2H5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USP35Q9P2H5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USP35Q9P2H5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
USP35Q9P2H5 RNU6-1285P-201ENST00000363480 105 ntBASIC3.94□□□□□ -1.78
USP35Q9P2H5 RNU6-1210P-201ENST00000363775 107 ntBASIC3.94□□□□□ -1.78
USP35Q9P2H5 SNORD32A-201ENST00000364805 84 ntBASIC3.94□□□□□ -1.78
USP35Q9P2H5 RNU6-220P-201ENST00000390919 107 ntBASIC3.94□□□□□ -1.78
USP35Q9P2H5 RNA5SP492-201ENST00000411330 114 ntBASIC3.94□□□□□ -1.78
USP35Q9P2H5 AL139396.1-201ENST00000421137 167 ntBASIC3.94□□□□□ -1.78
USP35Q9P2H5 AC098614.3-201ENST00000438957 440 ntBASIC3.94□□□□□ -1.78
USP35Q9P2H5 AC130509.1-201ENST00000464158 433 ntBASIC3.94□□□□□ -1.78
USP35Q9P2H5 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.94□□□□□ -1.78
USP35Q9P2H5 RNU6-1088P-201ENST00000516850 104 ntBASIC3.94□□□□□ -1.78
USP35Q9P2H5 RNA5SP454-201ENST00000517231 127 ntBASIC3.94□□□□□ -1.78
USP35Q9P2H5 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.94□□□□□ -1.78
USP35Q9P2H5 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
USP35Q9P2H5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.94□□□□□ -1.78
USP35Q9P2H5 AC073325.2-201ENST00000339545 159 ntBASIC3.93□□□□□ -1.78
USP35Q9P2H5 RNU6-655P-201ENST00000362858 107 ntBASIC3.93□□□□□ -1.78
USP35Q9P2H5 RNU6-227P-201ENST00000362865 103 ntBASIC3.93□□□□□ -1.78
USP35Q9P2H5 RNU6-43P-201ENST00000384302 107 ntBASIC3.93□□□□□ -1.78
USP35Q9P2H5 RN7SKP61-201ENST00000410642 295 ntBASIC3.93□□□□□ -1.78
USP35Q9P2H5 RNU6-325P-201ENST00000411132 105 ntBASIC3.93□□□□□ -1.78
USP35Q9P2H5 AC078809.1-201ENST00000427601 140 ntBASIC3.93□□□□□ -1.78
USP35Q9P2H5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.93□□□□□ -1.78
USP35Q9P2H5 MTND1P17-201ENST00000448961 204 ntBASIC3.93□□□□□ -1.78
USP35Q9P2H5 MTND1P11-201ENST00000456661 876 ntBASIC3.93□□□□□ -1.78
USP35Q9P2H5 SNORA25.11-201ENST00000515935 105 ntBASIC3.93□□□□□ -1.78
USP35Q9P2H5 RNU1-41P-201ENST00000516161 162 ntBASIC3.93□□□□□ -1.78
USP35Q9P2H5 RNU2-53P-201ENST00000516257 147 ntBASIC3.93□□□□□ -1.78
USP35Q9P2H5 RNU1-48P-201ENST00000516400 162 ntBASIC3.93□□□□□ -1.78
USP35Q9P2H5 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.93□□□□□ -1.78
USP35Q9P2H5 AC026464.5-201ENST00000562497 722 ntBASIC3.93□□□□□ -1.78
USP35Q9P2H5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.93□□□□□ -1.78
USP35Q9P2H5 AL627309.6-201ENST00000606857 840 ntBASIC3.93□□□□□ -1.78
USP35Q9P2H5 AL133215.3-201ENST00000609801 448 ntBASIC3.93□□□□□ -1.78
USP35Q9P2H5 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
USP35Q9P2H5 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.92□□□□□ -1.78
USP35Q9P2H5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.92□□□□□ -1.78
USP35Q9P2H5 RNU6-933P-201ENST00000384424 107 ntBASIC3.92□□□□□ -1.78
USP35Q9P2H5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.92□□□□□ -1.78
USP35Q9P2H5 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.92□□□□□ -1.78
USP35Q9P2H5 AC008267.5-201ENST00000424928 265 ntBASIC3.92□□□□□ -1.78
USP35Q9P2H5 AIMP1P2-201ENST00000425294 312 ntBASIC3.92□□□□□ -1.78
USP35Q9P2H5 ARL5AP4-201ENST00000430731 512 ntBASIC3.92□□□□□ -1.78
USP35Q9P2H5 RPL39P40-201ENST00000445481 146 ntBASIC3.92□□□□□ -1.78
USP35Q9P2H5 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.92□□□□□ -1.78
USP35Q9P2H5 PPP1R2P5-201ENST00000457256 603 ntBASIC3.92□□□□□ -1.78
USP35Q9P2H5 AL121594.1-201ENST00000475906 575 ntBASIC3.92□□□□□ -1.78
USP35Q9P2H5 RPL30P1-201ENST00000488676 339 ntBASIC3.92□□□□□ -1.78
USP35Q9P2H5 AC022447.4-201ENST00000504053 364 ntBASIC3.92□□□□□ -1.78
USP35Q9P2H5 RNU6-237P-201ENST00000515985 71 ntBASIC3.92□□□□□ -1.78
USP35Q9P2H5 AC109329.2-201ENST00000519658 482 ntBASIC3.92□□□□□ -1.78
USP35Q9P2H5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.92□□□□□ -1.78
USP35Q9P2H5 AC007318.2-201ENST00000620999 243 ntBASIC3.92□□□□□ -1.78
USP35Q9P2H5 MIR7843-201ENST00000622274 79 ntBASIC3.92□□□□□ -1.78
USP35Q9P2H5 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.92□□□□□ -1.78
USP35Q9P2H5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
USP35Q9P2H5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
USP35Q9P2H5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP35Q9P2H5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.91□□□□□ -1.78
USP35Q9P2H5 RNU6-212P-201ENST00000362642 104 ntBASIC3.91□□□□□ -1.78
USP35Q9P2H5 RNU6-1317P-201ENST00000364582 104 ntBASIC3.91□□□□□ -1.78
USP35Q9P2H5 BTF3L4P2-201ENST00000392798 346 ntBASIC3.91□□□□□ -1.78
USP35Q9P2H5 CBX3P9-201ENST00000402326 552 ntBASIC3.91□□□□□ -1.78
USP35Q9P2H5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.91□□□□□ -1.78
USP35Q9P2H5 AL133396.1-201ENST00000432048 687 ntBASIC3.91□□□□□ -1.78
USP35Q9P2H5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.91□□□□□ -1.78
USP35Q9P2H5 AL031659.1-201ENST00000447075 539 ntBASIC3.91□□□□□ -1.78
USP35Q9P2H5 AP005902.1-201ENST00000521358 186 ntBASIC3.91□□□□□ -1.78
USP35Q9P2H5 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.91□□□□□ -1.78
USP35Q9P2H5 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
USP35Q9P2H5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.91□□□□□ -1.78
USP35Q9P2H5 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.91□□□□□ -1.78
USP35Q9P2H5 MIR6733-201ENST00000635723 61 ntBASIC3.91□□□□□ -1.78
USP35Q9P2H5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP35Q9P2H5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.91□□□□□ -1.78
USP35Q9P2H5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.9□□□□□ -1.78
USP35Q9P2H5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
USP35Q9P2H5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
USP35Q9P2H5 Y_RNA.40-201ENST00000362645 93 ntBASIC3.9□□□□□ -1.79
USP35Q9P2H5 RNU1-72P-201ENST00000362976 153 ntBASIC3.9□□□□□ -1.79
USP35Q9P2H5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
USP35Q9P2H5 SNORD88.1-201ENST00000408684 91 ntBASIC3.9□□□□□ -1.79
USP35Q9P2H5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.9□□□□□ -1.79
USP35Q9P2H5 NCOR1P3-201ENST00000420479 303 ntBASIC3.9□□□□□ -1.79
USP35Q9P2H5 AL590632.1-201ENST00000424289 371 ntBASIC3.9□□□□□ -1.79
USP35Q9P2H5 DAP3P1-201ENST00000441522 278 ntBASIC3.9□□□□□ -1.79
USP35Q9P2H5 RNU7-187P-201ENST00000458985 68 ntBASIC3.9□□□□□ -1.79
USP35Q9P2H5 RPS29P27-201ENST00000463711 170 ntBASIC3.9□□□□□ -1.79
USP35Q9P2H5 AP004217.1-201ENST00000480579 346 ntBASIC3.9□□□□□ -1.79
USP35Q9P2H5 AP005639.2-201ENST00000527592 928 ntBASIC3.9□□□□□ -1.79
USP35Q9P2H5 HSPE1P20-201ENST00000538133 289 ntBASIC3.9□□□□□ -1.79
USP35Q9P2H5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.9□□□□□ -1.79
USP35Q9P2H5 AC018889.1-201ENST00000605372 397 ntBASIC3.9□□□□□ -1.79
USP35Q9P2H5 uc_338.5-201ENST00000611839 155 ntBASIC3.9□□□□□ -1.79
USP35Q9P2H5 AC107871.2-201ENST00000612894 502 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms