Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 RNU6-1274P-201ENST00000384557 107 ntBASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 U8.17-201ENST00000391292 132 ntBASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 MIR1253-201ENST00000408273 105 ntBASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 Y_RNA.593-201ENST00000410292 98 ntBASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 RNU6-615P-201ENST00000516065 106 ntBASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 SUMO2P16-201ENST00000519475 264 ntBASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 ATP5J2P6-201ENST00000565203 266 ntBASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 AL355480.1-201ENST00000629041 99 ntBASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.34□□□□□ -1.39
FOXD4L1Q9NU39 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
FOXD4L1Q9NU39 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
FOXD4L1Q9NU39 FAM35DP-201ENST00000323387 2712 ntBASIC6.34□□□□□ -1.4
FOXD4L1Q9NU39 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
FOXD4L1Q9NU39 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
FOXD4L1Q9NU39 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
FOXD4L1Q9NU39 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXD4L1Q9NU39 Y_RNA.298-201ENST00000364960 107 ntBASIC6.33□□□□□ -1.4
FOXD4L1Q9NU39 RN7SKP202-201ENST00000410439 330 ntBASIC6.33□□□□□ -1.4
FOXD4L1Q9NU39 RN7SL273P-201ENST00000481561 299 ntBASIC6.33□□□□□ -1.4
FOXD4L1Q9NU39 RNU6ATAC13P-201ENST00000516152 131 ntBASIC6.33□□□□□ -1.4
FOXD4L1Q9NU39 MIR4765-201ENST00000585007 77 ntBASIC6.33□□□□□ -1.4
FOXD4L1Q9NU39 AC000068.2-201ENST00000608816 460 ntBASIC6.33□□□□□ -1.4
FOXD4L1Q9NU39 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
FOXD4L1Q9NU39 AL162726.3-218ENST00000636401 95 ntBASIC6.33□□□□□ -1.4
FOXD4L1Q9NU39 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
FOXD4L1Q9NU39 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.33□□□□□ -1.4
FOXD4L1Q9NU39 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
FOXD4L1Q9NU39 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
FOXD4L1Q9NU39 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 Y_RNA.17-201ENST00000362433 111 ntBASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 RNA5SP433-201ENST00000364491 114 ntBASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 Y_RNA.253-201ENST00000364562 112 ntBASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 SNORA2.2-201ENST00000365473 135 ntBASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 RNU11-5P-201ENST00000391216 129 ntBASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 RN7SKP16-201ENST00000410180 299 ntBASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 RN7SKP156-201ENST00000410308 342 ntBASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 RN7SKP177-201ENST00000410567 355 ntBASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 COX5BP7-201ENST00000414780 274 ntBASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 RPL36AP10-201ENST00000421785 322 ntBASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 EEF1B2P6-201ENST00000445713 673 ntBASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 RN7SL727P-201ENST00000482164 296 ntBASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 RN7SKP66-201ENST00000516681 231 ntBASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 Y_RNA.714-201ENST00000517065 90 ntBASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 MIR3163-201ENST00000581592 73 ntBASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 AC093591.2-201ENST00000565254 3843 ntBASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
FOXD4L1Q9NU39 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 RNA5SP122-201ENST00000384457 108 ntBASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 MIR518F-201ENST00000384973 87 ntBASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 MIR551A-201ENST00000385042 96 ntBASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 MT-TI-201ENST00000387365 69 ntBASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 AC233266.1-201ENST00000454518 96 ntBASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 SNRPGP5-201ENST00000456003 220 ntBASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 RNA5SP112-201ENST00000515937 99 ntBASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 SCARNA23-201ENST00000516060 130 ntBASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 AC004486.1-201ENST00000546846 233 ntBASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 AC087685.1-201ENST00000587507 141 ntBASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 AC242852.1-201ENST00000612151 96 ntBASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 MIR6839-201ENST00000620425 113 ntBASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 AC244015.1-201ENST00000622301 99 ntBASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 MIR376A2-201ENST00000636782 80 ntBASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
FOXD4L1Q9NU39 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXD4L1Q9NU39 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
FOXD4L1Q9NU39 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
FOXD4L1Q9NU39 Y_RNA.410-201ENST00000383992 113 ntBASIC6.3□□□□□ -1.4
FOXD4L1Q9NU39 MIR1912-201ENST00000410389 80 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms