Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 U3.13-201ENST00000364804 214 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-25P-201ENST00000383873 107 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-1-201ENST00000383898 107 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-48P-201ENST00000384161 107 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-36P-201ENST00000384172 107 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-4P-201ENST00000384205 107 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-5P-201ENST00000384238 107 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-3P-201ENST00000384314 107 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-16P-201ENST00000384385 107 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-15P-201ENST00000384534 107 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-2-201ENST00000384627 107 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-29P-201ENST00000384637 107 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-9-201ENST00000384776 107 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-33P-201ENST00000384793 107 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 SNORA40.19-201ENST00000390846 128 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 AL645568.3-201ENST00000433683 316 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 AC022364.2-201ENST00000457963 554 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 ARL2BPP4-201ENST00000506854 471 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 AC108729.3-201ENST00000513484 108 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 SNORA48.11-201ENST00000517015 89 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-430P-201ENST00000517078 107 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 SUB1P2-201ENST00000556401 297 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 MIR4703-201ENST00000577728 79 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 VN1R80P-201ENST00000597126 338 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 AC025449.1-201ENST00000603896 529 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 RNU6-6P-201ENST00000606623 107 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 AC109347.2-201ENST00000610220 349 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 AC008121.3-201ENST00000618726 433 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 Z69908.1-201ENST00000622603 247 ntBASIC2.05□□□□□ -2.08
RPAP3Q9H6T3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 RNU6-661P-201ENST00000362409 107 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 RNU6-78P-201ENST00000362897 107 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 SNORA16.1-201ENST00000364597 132 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 AC068050.1-201ENST00000394891 380 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 HMGN2P39-201ENST00000398005 273 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 RNA5SP390-201ENST00000410191 113 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 RNA5SP338-201ENST00000410495 85 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 OR9R1P-201ENST00000412200 877 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 AC090960.1-201ENST00000421072 306 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 AC096920.1-201ENST00000423991 241 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 MTCO2P11-201ENST00000431069 680 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 AC132479.1-201ENST00000449160 144 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 AC098826.2-201ENST00000452011 651 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 ELL2P3-201ENST00000457883 1602 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 MTCYBP40-201ENST00000509390 1135 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 AC010486.3-201ENST00000511602 785 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 AP002963.1-201ENST00000530590 184 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 AC233702.2-202ENST00000562547 291 ntBASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.04□□□□□ -2.08
RPAP3Q9H6T3 MIR378A-201ENST00000362177 66 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 snoU2_19.1-201ENST00000362361 80 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 RNU6-527P-201ENST00000363425 104 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 Y_RNA.164-201ENST00000363709 102 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 RNU5E-7P-201ENST00000365290 117 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 Y_RNA.381-201ENST00000365666 102 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 U8.10-201ENST00000384260 133 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 MIR561-201ENST00000385216 97 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 RNU2-23P-201ENST00000410545 195 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 RNU4-46P-201ENST00000410818 138 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 SNORD56-201ENST00000413522 71 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 MTCO2P34-201ENST00000421994 607 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 MTND1P18-201ENST00000448191 573 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 RNU6-956P-201ENST00000458868 103 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 AC018868.1-201ENST00000491307 315 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 AC117532.1-201ENST00000514638 323 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 MTCO2P4-201ENST00000517968 247 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 AC107953.1-201ENST00000522216 297 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 AP005639.2-201ENST00000527592 928 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 IMMP1LP2-201ENST00000552954 492 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 AC007375.1-201ENST00000554513 578 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 AL391840.1-201ENST00000571144 367 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 AC068790.2-201ENST00000602601 557 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 AC078795.2-201ENST00000602835 1252 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 AC097520.1-201ENST00000624435 385 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 Z69720.2-201ENST00000624755 279 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 AC009487.4-201ENST00000624969 3585 ntBASIC2.03□□□□□ -2.08
RPAP3Q9H6T3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RPAP3Q9H6T3 Y_RNA.324-201ENST00000365165 102 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms