Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 SNORD56.1-201ENST00000362913 68 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 RNU6-450P-201ENST00000364654 107 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 MIR591-201ENST00000385290 95 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 SNORA69.1-201ENST00000390904 137 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 RN7SKP111-201ENST00000410349 271 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 AC005300.1-201ENST00000428401 373 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 AL714022.1-201ENST00000439897 151 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 AL031659.1-201ENST00000447075 539 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 AL513124.1-201ENST00000450410 614 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 AC093852.1-201ENST00000503587 266 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 AC097462.2-201ENST00000504623 481 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 RNU7-175P-201ENST00000515915 61 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 RNA5SP380-201ENST00000517190 98 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 AC006600.1-201ENST00000572529 153 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 HMGN2P15-201ENST00000585707 270 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 AC060766.3-201ENST00000591442 263 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 MIR3199-2-201ENST00000636243 86 ntBASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
AMBRA1Q9C0C7 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 RNA5SP197-201ENST00000363357 119 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 Y_RNA.152-201ENST00000363578 100 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 SNORA12.2-201ENST00000391040 156 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 RPL21P3-201ENST00000395517 478 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 MIR1252-201ENST00000408861 65 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 HMGN2P20-201ENST00000437531 273 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 AC010099.1-201ENST00000455434 375 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 AC146507.2-201ENST00000460608 476 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 RPL21P10-201ENST00000463521 490 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 RPL22P13-201ENST00000493291 347 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 RNU6-635P-201ENST00000516651 102 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 AC040926.1-201ENST00000530195 238 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 AP002404.1-201ENST00000532005 451 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 AC104581.2-201ENST00000572227 430 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 AC009163.5-201ENST00000575421 637 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 AL355297.3-201ENST00000604082 446 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 AL356157.2-201ENST00000605122 111 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 AC068831.7-201ENST00000616954 363 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 U2.1-201ENST00000618978 145 ntBASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.11□□□□□ -1.91
AMBRA1Q9C0C7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 RNU6-238P-201ENST00000363313 106 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 Y_RNA.405-201ENST00000383979 100 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 Y_RNA.451-201ENST00000384200 100 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 Y_RNA.524-201ENST00000384564 100 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 Y_RNA.561-201ENST00000384694 100 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 SAR1AP2-201ENST00000392696 594 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 MIR190B-201ENST00000401119 79 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 MIR1302-3-201ENST00000408128 138 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 MTCO3P19-201ENST00000415864 321 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 AC007969.2-201ENST00000441891 191 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 MTCO3P8-201ENST00000453691 755 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 SNORA31.23-201ENST00000517219 133 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 MRPS36P4-201ENST00000534436 298 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 AC006199.1-201ENST00000548728 219 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 MIR3149-201ENST00000584629 83 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 MIR3922-201ENST00000585192 84 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 AC019159.1-201ENST00000605094 187 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 AC107294.3-201ENST00000609211 526 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 AL021879.1-201ENST00000611756 288 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 AC233981.2-201ENST00000611524 1614 ntBASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
AMBRA1Q9C0C7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 AC093831.2-201ENST00000624393 3427 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 Y_RNA.106-201ENST00000363189 100 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 Y_RNA.452-201ENST00000384202 108 ntBASIC3.09□□□□□ -1.91
AMBRA1Q9C0C7 Y_RNA.526-201ENST00000384572 110 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 203.1 ms