Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 Y_RNA.310-201ENST00000365063 113 ntBASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 MIR488-201ENST00000365739 83 ntBASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 SNORA51.10-201ENST00000384418 136 ntBASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 RNU6-1152P-201ENST00000384576 107 ntBASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 AL691449.1-201ENST00000426570 421 ntBASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 AC104619.4-201ENST00000510773 249 ntBASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 SNORA40.13-201ENST00000516379 120 ntBASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 RPL30P11-203ENST00000598995 310 ntBASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 AL031274.2-201ENST00000599419 203 ntBASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 MIR8057-201ENST00000620957 69 ntBASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 AC092376.2-201ENST00000622621 4116 ntBASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.39□□□□□ -1.71
COL25A1Q9BXS0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 AC022336.2-201ENST00000568966 2538 ntBASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 RNU6-799P-201ENST00000363567 107 ntBASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 SNORD45.3-201ENST00000363836 72 ntBASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 RNU6-1264P-201ENST00000383891 107 ntBASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 RNU6-820P-201ENST00000384273 107 ntBASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 AL603914.1-201ENST00000401964 204 ntBASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 RN7SKP61-201ENST00000410642 295 ntBASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 RPL7AP49-201ENST00000429522 581 ntBASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 AL591438.1-201ENST00000433508 581 ntBASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 AC007969.2-201ENST00000441891 191 ntBASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 AC007215.1-201ENST00000464893 276 ntBASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 AL592156.1-201ENST00000508758 304 ntBASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 AC093331.1-201ENST00000521474 169 ntBASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 AL442128.1-201ENST00000615151 90 ntBASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
COL25A1Q9BXS0 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 MTND5P18-201ENST00000445624 1801 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 AC104623.2-202ENST00000623477 4002 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 MIR367-201ENST00000362299 68 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 RN7SKP185-201ENST00000362813 326 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 RNU6-727P-201ENST00000363592 107 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 RNU6-1141P-201ENST00000364520 107 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 RNU6-144P-201ENST00000383951 107 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 RNU6-1074P-201ENST00000383995 104 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 Y_RNA.456-201ENST00000384232 111 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 MIR29B2-201ENST00000385055 81 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 RNU6-837P-201ENST00000391056 108 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 RNU2-68P-201ENST00000410878 191 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 AC009237.8-201ENST00000445492 379 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 AC012671.1-201ENST00000451912 203 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 SNRPGP7-201ENST00000469016 106 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 RN7SL323P-201ENST00000494712 295 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 CYCSP30-201ENST00000546447 172 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 AC021231.3-201ENST00000558497 370 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 CYCSP39-201ENST00000565821 309 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 U6.99-201ENST00000637524 83 ntBASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.37□□□□□ -1.71
COL25A1Q9BXS0 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 RNU1-62P-201ENST00000362599 164 ntBASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 Y_RNA.163-201ENST00000363702 113 ntBASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 Y_RNA.341-201ENST00000365341 102 ntBASIC4.36□□□□□ -1.71
COL25A1Q9BXS0 SNORA51.5-201ENST00000384126 131 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms