Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PHOX2BQ99453 Y_RNA.251-201ENST00000364551 99 ntBASIC4.82□□□□□ -1.64
PHOX2BQ99453 RNU6-915P-201ENST00000364943 103 ntBASIC4.82□□□□□ -1.64
PHOX2BQ99453 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PHOX2BQ99453 SNORA70.10-201ENST00000384515 134 ntBASIC4.82□□□□□ -1.64
PHOX2BQ99453 AL133475.1-201ENST00000404414 305 ntBASIC4.82□□□□□ -1.64
PHOX2BQ99453 SNORA36B-201ENST00000410438 131 ntBASIC4.82□□□□□ -1.64
PHOX2BQ99453 RPS29P17-201ENST00000430795 166 ntBASIC4.82□□□□□ -1.64
PHOX2BQ99453 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.82□□□□□ -1.64
PHOX2BQ99453 RPL36AP21-201ENST00000490372 323 ntBASIC4.82□□□□□ -1.64
PHOX2BQ99453 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.82□□□□□ -1.64
PHOX2BQ99453 Y_RNA.709-201ENST00000516952 92 ntBASIC4.82□□□□□ -1.64
PHOX2BQ99453 HSPE1P18-201ENST00000517602 280 ntBASIC4.82□□□□□ -1.64
PHOX2BQ99453 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.82□□□□□ -1.64
PHOX2BQ99453 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.82□□□□□ -1.64
PHOX2BQ99453 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.82□□□□□ -1.64
PHOX2BQ99453 AC007179.3-201ENST00000604976 235 ntBASIC4.82□□□□□ -1.64
PHOX2BQ99453 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.82□□□□□ -1.64
PHOX2BQ99453 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.82□□□□□ -1.64
PHOX2BQ99453 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PHOX2BQ99453 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.82□□□□□ -1.64
PHOX2BQ99453 ZNF702P-202ENST00000434269 1966 ntBASIC4.82□□□□□ -1.64
PHOX2BQ99453 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PHOX2BQ99453 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.81□□□□□ -1.64
PHOX2BQ99453 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHOX2BQ99453 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHOX2BQ99453 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.81□□□□□ -1.64
PHOX2BQ99453 LINC01355-201ENST00000566551 5444 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 RNU6-271P-201ENST00000363858 105 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 RNU1-57P-201ENST00000384491 166 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 MIR518C-201ENST00000384822 101 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 MIR634-201ENST00000385208 97 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 MIR548B-201ENST00000385247 97 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 Y_RNA.584-201ENST00000391090 114 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 RNA5SP496-201ENST00000391240 109 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 MIR873-201ENST00000401120 77 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 AL591034.1-201ENST00000407447 340 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 AC023141.4-201ENST00000412031 328 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 AL162591.2-201ENST00000449634 317 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.81□□□□□ -1.64
PHOX2BQ99453 RNU6-561P-201ENST00000516222 102 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 RNU2-58P-201ENST00000516403 183 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 AC099778.2-201ENST00000610904 211 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 AC012640.5-201ENST00000623897 319 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 MIR492-201ENST00000638676 116 ntBASIC4.81□□□□□ -1.64
PHOX2BQ99453 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.81□□□□□ -1.64
PHOX2BQ99453 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PHOX2BQ99453 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
PHOX2BQ99453 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHOX2BQ99453 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHOX2BQ99453 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
PHOX2BQ99453 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PHOX2BQ99453 RNU6-755P-201ENST00000364400 103 ntBASIC4.8□□□□□ -1.64
PHOX2BQ99453 U8.7-201ENST00000364940 136 ntBASIC4.8□□□□□ -1.64
PHOX2BQ99453 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHOX2BQ99453 MIR200C-201ENST00000384980 68 ntBASIC4.8□□□□□ -1.64
PHOX2BQ99453 AL512604.1-201ENST00000404812 257 ntBASIC4.8□□□□□ -1.64
PHOX2BQ99453 MIR1185-2-201ENST00000408687 86 ntBASIC4.8□□□□□ -1.64
PHOX2BQ99453 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
PHOX2BQ99453 RPS29P9-201ENST00000440360 171 ntBASIC4.8□□□□□ -1.64
PHOX2BQ99453 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.8□□□□□ -1.64
PHOX2BQ99453 RPL30P14-201ENST00000482744 348 ntBASIC4.8□□□□□ -1.64
PHOX2BQ99453 AP003730.1-201ENST00000524605 285 ntBASIC4.8□□□□□ -1.64
PHOX2BQ99453 MIR4679-2-201ENST00000578358 77 ntBASIC4.8□□□□□ -1.64
PHOX2BQ99453 MIR378D2-201ENST00000580636 98 ntBASIC4.8□□□□□ -1.64
PHOX2BQ99453 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.8□□□□□ -1.64
PHOX2BQ99453 AP003357.1-201ENST00000604497 148 ntBASIC4.8□□□□□ -1.64
PHOX2BQ99453 AC068647.2-201ENST00000637380 353 ntBASIC4.8□□□□□ -1.64
PHOX2BQ99453 AC010889.1-201ENST00000566193 2666 ntBASIC4.8□□□□□ -1.64
PHOX2BQ99453 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PHOX2BQ99453 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PHOX2BQ99453 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.8□□□□□ -1.64
PHOX2BQ99453 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PHOX2BQ99453 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.79□□□□□ -1.64
PHOX2BQ99453 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.79□□□□□ -1.64
PHOX2BQ99453 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHOX2BQ99453 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PHOX2BQ99453 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHOX2BQ99453 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.79□□□□□ -1.64
PHOX2BQ99453 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PHOX2BQ99453 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PHOX2BQ99453 AC002546.1-201ENST00000588041 2504 ntBASIC4.79□□□□□ -1.64
PHOX2BQ99453 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
PHOX2BQ99453 RNU6-1305P-201ENST00000364353 104 ntBASIC4.79□□□□□ -1.64
PHOX2BQ99453 MIR589-201ENST00000385238 99 ntBASIC4.79□□□□□ -1.64
PHOX2BQ99453 RNU2-55P-201ENST00000411146 174 ntBASIC4.79□□□□□ -1.64
PHOX2BQ99453 AC114755.2-201ENST00000413520 361 ntBASIC4.79□□□□□ -1.64
PHOX2BQ99453 AC007738.1-201ENST00000413892 348 ntBASIC4.79□□□□□ -1.64
PHOX2BQ99453 AC016925.1-201ENST00000458303 298 ntBASIC4.79□□□□□ -1.64
PHOX2BQ99453 RNU7-107P-201ENST00000459121 61 ntBASIC4.79□□□□□ -1.64
PHOX2BQ99453 RPL23AP62-201ENST00000463396 453 ntBASIC4.79□□□□□ -1.64
PHOX2BQ99453 Y_RNA.692-201ENST00000516627 105 ntBASIC4.79□□□□□ -1.64
PHOX2BQ99453 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.79□□□□□ -1.64
PHOX2BQ99453 RPL23AP97-201ENST00000568955 471 ntBASIC4.79□□□□□ -1.64
PHOX2BQ99453 AC022726.1-201ENST00000587475 207 ntBASIC4.79□□□□□ -1.64
PHOX2BQ99453 AC023043.3-201ENST00000593113 385 ntBASIC4.79□□□□□ -1.64
PHOX2BQ99453 HSPE1P7-201ENST00000604681 321 ntBASIC4.79□□□□□ -1.64
PHOX2BQ99453 AC091979.2-201ENST00000607514 214 ntBASIC4.79□□□□□ -1.64
PHOX2BQ99453 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.79□□□□□ -1.64
PHOX2BQ99453 AC002076.2-201ENST00000617362 122 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms