Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 CYCSP33-201ENST00000414485 327 ntBASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 AC009961.2-201ENST00000435771 251 ntBASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 AC007969.2-201ENST00000441891 191 ntBASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 MTCYBP1-201ENST00000454315 1119 ntBASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 TRBV12-1-201ENST00000479785 344 ntBASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 AC023790.1-201ENST00000482174 347 ntBASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 RPL30P1-201ENST00000488676 339 ntBASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 AC092436.1-201ENST00000506450 503 ntBASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 RNU6-410P-201ENST00000517006 107 ntBASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 AP002453.2-201ENST00000533503 320 ntBASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 AC091544.4-201ENST00000555268 342 ntBASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 AC098848.2-201ENST00000588023 330 ntBASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 MIR8081-201ENST00000611533 95 ntBASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 AC008250.2-201ENST00000615261 205 ntBASIC1.61□□□□□ -2.15
PKNOX2Q96KN3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 snoU2_19.1-201ENST00000362361 80 ntBASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 RNU6-116P-201ENST00000384042 109 ntBASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 SNORA70B-201ENST00000384210 135 ntBASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 HMGN1P14-201ENST00000412459 517 ntBASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 CYCSP46-201ENST00000423569 204 ntBASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 AC079781.2-201ENST00000446424 169 ntBASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 AC005908.1-201ENST00000468701 347 ntBASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 RPL23AP94-201ENST00000512518 302 ntBASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 AC074344.1-201ENST00000512823 224 ntBASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 AC104136.1-201ENST00000512969 394 ntBASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 AC091135.1-201ENST00000585943 307 ntBASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 AC078795.2-201ENST00000602835 1252 ntBASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 AC091834.1-201ENST00000614543 472 ntBASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 AC011155.2-201ENST00000623202 216 ntBASIC1.6□□□□□ -2.15
PKNOX2Q96KN3 RNU6-45P-201ENST00000384471 107 ntBASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 MIR597-201ENST00000384968 97 ntBASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 RNU6-550P-201ENST00000391057 101 ntBASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 SNORA40.18-201ENST00000391200 128 ntBASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 RNU6-195P-201ENST00000411352 109 ntBASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 AL365203.2-201ENST00000423444 196 ntBASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 ISCA1P6-201ENST00000427740 390 ntBASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 GPR143P-201ENST00000434155 205 ntBASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 RPL32P28-201ENST00000443577 397 ntBASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 RPL39P29-201ENST00000447779 157 ntBASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 GAPDHP17-201ENST00000449858 1001 ntBASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 AP001506.1-201ENST00000615444 211 ntBASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 Z69720.2-201ENST00000624755 279 ntBASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 U6.114-201ENST00000636407 96 ntBASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 U4.7-201ENST00000638126 106 ntBASIC1.59□□□□□ -2.15
PKNOX2Q96KN3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
PKNOX2Q96KN3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 RNU6-74P-201ENST00000384235 107 ntBASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 SNORA40.3-201ENST00000390964 122 ntBASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 MTND3P17-201ENST00000416968 344 ntBASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 AL591043.1-201ENST00000432461 424 ntBASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 RPS15AP10-201ENST00000432472 382 ntBASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 AC007677.1-201ENST00000445757 515 ntBASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 FDX1P2-201ENST00000450769 375 ntBASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 AL033528.1-201ENST00000453780 140 ntBASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 RPS26P55-201ENST00000471178 356 ntBASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 SNORD27.1-201ENST00000516319 72 ntBASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 RNU6-965P-201ENST00000516721 96 ntBASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 MIR3915-201ENST00000578518 97 ntBASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 MIR7843-201ENST00000622274 79 ntBASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 MTND4P23-201ENST00000447723 1363 ntBASIC1.58□□□□□ -2.16
PKNOX2Q96KN3 RNU4-21P-201ENST00000362802 126 ntBASIC1.57□□□□□ -2.16
PKNOX2Q96KN3 RNU6-1287P-201ENST00000362914 107 ntBASIC1.57□□□□□ -2.16
PKNOX2Q96KN3 RNU6-527P-201ENST00000363425 104 ntBASIC1.57□□□□□ -2.16
PKNOX2Q96KN3 RNU6-1097P-201ENST00000363586 107 ntBASIC1.57□□□□□ -2.16
PKNOX2Q96KN3 SNORA62.1-201ENST00000364287 154 ntBASIC1.57□□□□□ -2.16
PKNOX2Q96KN3 RNU6-1164P-201ENST00000364428 107 ntBASIC1.57□□□□□ -2.16
PKNOX2Q96KN3 RNU6-108P-201ENST00000365558 107 ntBASIC1.57□□□□□ -2.16
PKNOX2Q96KN3 RNU6-1060P-201ENST00000384664 107 ntBASIC1.57□□□□□ -2.16
PKNOX2Q96KN3 MIR517C-201ENST00000385103 95 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms