Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 SNORD23.1-201ENST00000408212 104 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 RPS12P2-201ENST00000439728 269 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 AP000705.1-201ENST00000454567 350 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 AC026436.1-201ENST00000510537 270 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 RNU6-506P-201ENST00000516553 94 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 Y_RNA.693-201ENST00000516641 110 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 RNU6-835P-201ENST00000516974 104 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 AC034114.1-201ENST00000520293 285 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 AP000763.2-201ENST00000540641 163 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 MIR3670-2-201ENST00000582974 65 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 MIR3670-1-201ENST00000584160 65 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 MIR3670-3-201ENST00000584855 65 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 BNIP3P16-201ENST00000589779 534 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 AL031274.2-201ENST00000599419 203 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 MIR3670-4-201ENST00000612260 65 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 AC010297.1-201ENST00000623948 149 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 MIR1291-201ENST00000627649 87 ntBASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SNRNP40Q96DI7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 MTND5P6-201ENST00000422338 1798 ntBASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 Y_RNA.3-201ENST00000362331 103 ntBASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 RNU4-66P-201ENST00000365199 138 ntBASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 AL162578.1-201ENST00000406202 378 ntBASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 HMGB3P2-201ENST00000411913 584 ntBASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 HMGB1P18-201ENST00000438801 619 ntBASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 AC243964.1-201ENST00000441814 261 ntBASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 AC009646.1-201ENST00000510455 318 ntBASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 RNU6-667P-201ENST00000517186 102 ntBASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 RN7SKP256-201ENST00000517201 314 ntBASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 CYCSP27-201ENST00000527643 293 ntBASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 AC103996.1-201ENST00000555468 102 ntBASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 AL159153.1-201ENST00000619688 317 ntBASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 MIR6873-201ENST00000622788 63 ntBASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SNRNP40Q96DI7 RNA5SP99-201ENST00000364020 114 ntBASIC2.15□□□□□ -2.07
SNRNP40Q96DI7 RNU4-56P-201ENST00000364700 142 ntBASIC2.15□□□□□ -2.07
SNRNP40Q96DI7 AL079342.1-201ENST00000401460 267 ntBASIC2.15□□□□□ -2.07
SNRNP40Q96DI7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.15□□□□□ -2.07
SNRNP40Q96DI7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.15□□□□□ -2.07
SNRNP40Q96DI7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.15□□□□□ -2.07
SNRNP40Q96DI7 AL353752.1-201ENST00000454946 260 ntBASIC2.15□□□□□ -2.07
SNRNP40Q96DI7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.15□□□□□ -2.07
SNRNP40Q96DI7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.15□□□□□ -2.07
SNRNP40Q96DI7 SNORA31.15-201ENST00000516771 132 ntBASIC2.15□□□□□ -2.07
SNRNP40Q96DI7 AC026464.5-201ENST00000562497 722 ntBASIC2.15□□□□□ -2.07
SNRNP40Q96DI7 HMGB1P33-201ENST00000563485 527 ntBASIC2.15□□□□□ -2.07
SNRNP40Q96DI7 AC078899.2-201ENST00000595282 212 ntBASIC2.15□□□□□ -2.07
SNRNP40Q96DI7 AC063943.3-201ENST00000615562 356 ntBASIC2.15□□□□□ -2.07
SNRNP40Q96DI7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SNRNP40Q96DI7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SNRNP40Q96DI7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 AC069528.2-201ENST00000624849 1991 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 SNORA69-201ENST00000383895 132 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 RNU6-692P-201ENST00000384496 107 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 MIR181A1-201ENST00000385026 110 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 RNU6-780P-201ENST00000391030 104 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 RNU6-648P-201ENST00000410190 107 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 AL603825.1-201ENST00000438481 80 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 MTCO3P38-201ENST00000468910 766 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 AC107032.1-201ENST00000485945 480 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 CCDC34P1-201ENST00000507441 517 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 RNU6-189P-201ENST00000516120 101 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 RNU6-991P-201ENST00000516168 107 ntBASIC2.14□□□□□ -2.07
SNRNP40Q96DI7 RNU6-548P-201ENST00000517083 115 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms