Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 AC007179.3-201ENST00000604976 235 ntBASIC4.09□□□□□ -1.75
TMEM40Q8WWA1 AC024581.2-201ENST00000619986 252 ntBASIC4.09□□□□□ -1.75
TMEM40Q8WWA1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.09□□□□□ -1.75
TMEM40Q8WWA1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
TMEM40Q8WWA1 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
TMEM40Q8WWA1 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.09□□□□□ -1.76
TMEM40Q8WWA1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.09□□□□□ -1.76
TMEM40Q8WWA1 UBE3AP2-201ENST00000429033 2259 ntBASIC4.09□□□□□ -1.76
TMEM40Q8WWA1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 RNU1-100P-201ENST00000365255 165 ntBASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 MIR513A2-201ENST00000385249 127 ntBASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 Z82188.1-201ENST00000436709 154 ntBASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 RPL26P9-201ENST00000457466 433 ntBASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 RPS27AP10-201ENST00000496103 208 ntBASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 VWA8P1-201ENST00000510889 176 ntBASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 RN7SKP272-201ENST00000516988 232 ntBASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 AL161756.2-201ENST00000604597 246 ntBASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 AL137849.1-201ENST00000604767 169 ntBASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 U3.45-201ENST00000607547 219 ntBASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMEM40Q8WWA1 CUL1P1-201ENST00000509510 2425 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 Y_RNA.43-201ENST00000362670 111 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 Y_RNA.218-201ENST00000364218 104 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 EIF1AXP1-201ENST00000419267 435 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 AC024067.1-201ENST00000426199 223 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 AP000907.1-201ENST00000428428 510 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 CYCSP32-201ENST00000440548 321 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 AC243964.1-201ENST00000441814 261 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 AC009237.7-201ENST00000447357 229 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 AL353705.4-201ENST00000449661 238 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 snoU13.30-201ENST00000458951 104 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 RNA5SP310-201ENST00000459084 116 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 AC091179.1-201ENST00000461606 579 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 AC097462.2-201ENST00000504623 481 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 RNU6-1333P-201ENST00000516162 93 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 SNORA27.4-201ENST00000516650 95 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 AC112693.2-201ENST00000556538 232 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 AC090617.3-201ENST00000573670 475 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 AC005828.6-201ENST00000606610 232 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 AC073349.3-201ENST00000617616 186 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 AC073308.1-201ENST00000623696 305 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 SCARNA4-201ENST00000629045 128 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 SCN1A-220ENST00000641603 12506 ntBASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TMEM40Q8WWA1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 SNORD56.1-201ENST00000362913 68 ntBASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 Y_RNA.446-201ENST00000384178 104 ntBASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 RNU6-514P-201ENST00000384208 107 ntBASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 MIR490-201ENST00000384865 128 ntBASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 MIR3074-201ENST00000384885 81 ntBASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 AL357075.1-201ENST00000404107 726 ntBASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 OOSP1P1-201ENST00000423265 274 ntBASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 IFNA11P-201ENST00000446352 526 ntBASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 SNORD2.1-201ENST00000458762 69 ntBASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 AC010409.1-201ENST00000487382 476 ntBASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 PDCD5P2-201ENST00000507570 312 ntBASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 RNU1-61P-201ENST00000516107 151 ntBASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 RNU7-110P-201ENST00000516891 62 ntBASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 RNU6-971P-201ENST00000516920 106 ntBASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.06□□□□□ -1.76
TMEM40Q8WWA1 NACAP3-201ENST00000552100 481 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms