Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 SNORA11.1-201ENST00000408133 129 ntBASIC2.36□□□□□ -2.03
CCDC89Q8N998 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC89Q8N998 AC244636.1-201ENST00000421152 228 ntBASIC2.36□□□□□ -2.03
CCDC89Q8N998 SNAP23P1-201ENST00000433229 246 ntBASIC2.36□□□□□ -2.03
CCDC89Q8N998 MTCO2P16-201ENST00000436962 677 ntBASIC2.36□□□□□ -2.03
CCDC89Q8N998 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC89Q8N998 AC104435.1-201ENST00000483483 166 ntBASIC2.36□□□□□ -2.03
CCDC89Q8N998 AC108078.1-201ENST00000508073 725 ntBASIC2.36□□□□□ -2.03
CCDC89Q8N998 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC89Q8N998 MIR5583-1-201ENST00000580941 59 ntBASIC2.36□□□□□ -2.03
CCDC89Q8N998 RN7SKP299-201ENST00000606679 301 ntBASIC2.36□□□□□ -2.03
CCDC89Q8N998 AC046143.2-201ENST00000609789 160 ntBASIC2.36□□□□□ -2.03
CCDC89Q8N998 AC005296.1-201ENST00000616145 209 ntBASIC2.36□□□□□ -2.03
CCDC89Q8N998 AC009509.4-201ENST00000619202 509 ntBASIC2.36□□□□□ -2.03
CCDC89Q8N998 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC89Q8N998 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC89Q8N998 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC89Q8N998 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC89Q8N998 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 OR5H15-201ENST00000383696 930 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 SNORD116-9-201ENST00000384000 95 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 SNORD116-3-201ENST00000384287 95 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 SNORD116-7-201ENST00000384404 95 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 SNORD116-5-201ENST00000384462 95 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 MIR483-201ENST00000385070 76 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CCDC89Q8N998 MIR676-201ENST00000390702 67 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 RPL17P50-201ENST00000396131 546 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 AL356432.1-201ENST00000405809 419 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 Z92545.1-201ENST00000411782 234 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CCDC89Q8N998 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC89Q8N998 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC89Q8N998 AL133396.1-201ENST00000432048 687 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 AL031659.1-201ENST00000447075 539 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 AC016632.1-201ENST00000503994 196 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC89Q8N998 RNU6-991P-201ENST00000516168 107 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 AP005660.1-201ENST00000522972 293 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC89Q8N998 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC89Q8N998 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC89Q8N998 MIR3923-201ENST00000579521 83 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 CYP2C61P-201ENST00000604072 290 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CCDC89Q8N998 AL160394.1-201ENST00000624765 724 ntBASIC2.35□□□□□ -2.03
CCDC89Q8N998 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC89Q8N998 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CCDC89Q8N998 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CCDC89Q8N998 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC89Q8N998 Y_RNA.359-201ENST00000365498 102 ntBASIC2.34□□□□□ -2.03
CCDC89Q8N998 RNU6-26P-201ENST00000383985 107 ntBASIC2.34□□□□□ -2.03
CCDC89Q8N998 SNORA8-201ENST00000384574 139 ntBASIC2.34□□□□□ -2.03
CCDC89Q8N998 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CCDC89Q8N998 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC89Q8N998 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC89Q8N998 RPL23AP83-201ENST00000434984 473 ntBASIC2.34□□□□□ -2.03
CCDC89Q8N998 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC89Q8N998 AC091133.4-201ENST00000511142 308 ntBASIC2.34□□□□□ -2.03
CCDC89Q8N998 RNU4-29P-201ENST00000515943 174 ntBASIC2.34□□□□□ -2.03
CCDC89Q8N998 AP003034.1-201ENST00000534621 422 ntBASIC2.34□□□□□ -2.03
CCDC89Q8N998 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC89Q8N998 KPNA2P1-201ENST00000458289 1591 ntBASIC2.34□□□□□ -2.03
CCDC89Q8N998 AC233981.2-201ENST00000611524 1614 ntBASIC2.34□□□□□ -2.04
CCDC89Q8N998 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC89Q8N998 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC89Q8N998 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC89Q8N998 RNU6-1042P-201ENST00000384204 107 ntBASIC2.33□□□□□ -2.04
CCDC89Q8N998 MTCYBP2-201ENST00000407745 171 ntBASIC2.33□□□□□ -2.04
CCDC89Q8N998 RNU4-55P-201ENST00000410731 137 ntBASIC2.33□□□□□ -2.04
CCDC89Q8N998 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.33□□□□□ -2.04
CCDC89Q8N998 AL353193.1-201ENST00000421444 268 ntBASIC2.33□□□□□ -2.04
CCDC89Q8N998 HMGN2P19-201ENST00000425149 265 ntBASIC2.33□□□□□ -2.04
CCDC89Q8N998 RPL23AP95-201ENST00000426806 265 ntBASIC2.33□□□□□ -2.04
CCDC89Q8N998 AL606489.2-201ENST00000433886 234 ntBASIC2.33□□□□□ -2.04
CCDC89Q8N998 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC89Q8N998 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC89Q8N998 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC89Q8N998 RPL23AP42-201ENST00000471152 471 ntBASIC2.33□□□□□ -2.04
CCDC89Q8N998 RN7SL636P-201ENST00000497504 294 ntBASIC2.33□□□□□ -2.04
CCDC89Q8N998 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC89Q8N998 SNORA31.16-201ENST00000516773 139 ntBASIC2.33□□□□□ -2.04
CCDC89Q8N998 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC89Q8N998 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC89Q8N998 AC090115.3-201ENST00000553218 849 ntBASIC2.33□□□□□ -2.04
CCDC89Q8N998 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC89Q8N998 AC010620.1-201ENST00000601088 1102 ntBASIC2.33□□□□□ -2.04
CCDC89Q8N998 AL078605.1-201ENST00000603529 500 ntBASIC2.33□□□□□ -2.04
CCDC89Q8N998 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.33□□□□□ -2.04
CCDC89Q8N998 HULC.1-201ENST00000612720 240 ntBASIC2.33□□□□□ -2.04
CCDC89Q8N998 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.33□□□□□ -2.04
CCDC89Q8N998 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC89Q8N998 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC89Q8N998 RNA5SP37-201ENST00000365420 130 ntBASIC2.32□□□□□ -2.04
CCDC89Q8N998 MIR597-201ENST00000384968 97 ntBASIC2.32□□□□□ -2.04
CCDC89Q8N998 SNORA12-201ENST00000391162 147 ntBASIC2.32□□□□□ -2.04
CCDC89Q8N998 EIF4EP2-201ENST00000422816 654 ntBASIC2.32□□□□□ -2.04
CCDC89Q8N998 UBE2V1P4-201ENST00000425374 344 ntBASIC2.32□□□□□ -2.04
CCDC89Q8N998 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC89Q8N998 AL121601.2-201ENST00000438019 707 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms