Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC022202.1-201ENST00000613515 211 ntBASIC1.87□□□□□ -2.11
ATL3Q6DD88 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ATL3Q6DD88 RNU6-1103P-201ENST00000384150 107 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 RNU6-1127P-201ENST00000384580 107 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 CBX3P9-201ENST00000402326 552 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 AL033519.2-201ENST00000403958 392 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 RNU4-46P-201ENST00000410818 138 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 SNORD56-201ENST00000413522 71 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.86□□□□□ -2.11
ATL3Q6DD88 AL358453.1-201ENST00000422522 250 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.86□□□□□ -2.11
ATL3Q6DD88 AL358934.1-201ENST00000432346 324 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 MTCO1P19-201ENST00000443487 500 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 AC010095.1-201ENST00000443543 144 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 AC245102.2-201ENST00000448956 180 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.86□□□□□ -2.11
ATL3Q6DD88 HMGB1P35-201ENST00000503360 598 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 MTCO3P7-201ENST00000510008 774 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.86□□□□□ -2.11
ATL3Q6DD88 AC105417.1-201ENST00000514691 285 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 Y_RNA.688-201ENST00000516565 95 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 RN7SKP219-201ENST00000516825 296 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 RNA5SP503-201ENST00000517047 117 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 AP002963.1-201ENST00000530590 184 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 AL356057.1-201ENST00000533798 831 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.86□□□□□ -2.11
ATL3Q6DD88 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.86□□□□□ -2.11
ATL3Q6DD88 AC093249.1-201ENST00000567049 203 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 AL391840.1-201ENST00000571144 367 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.86□□□□□ -2.11
ATL3Q6DD88 AC243960.4-201ENST00000600532 288 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 AC025811.1-201ENST00000604312 472 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 AP001596.2-201ENST00000608410 312 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 uc_338.5-201ENST00000611839 155 ntBASIC1.86□□□□□ -2.11
ATL3Q6DD88 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.86□□□□□ -2.11
ATL3Q6DD88 RNU6-655P-201ENST00000362858 107 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 SNORD56.1-201ENST00000362913 68 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 Y_RNA.77-201ENST00000362962 107 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 RNU6-1120P-201ENST00000362988 108 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 U3.13-201ENST00000364804 214 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 RNU6-1303P-201ENST00000364841 107 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 RNA5SP363-201ENST00000365072 115 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 Y_RNA.553-201ENST00000384670 102 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 MIR518A2-201ENST00000384966 87 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
ATL3Q6DD88 SNORA16.2-201ENST00000390991 127 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 RN7SKP101-201ENST00000411376 320 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.85□□□□□ -2.11
ATL3Q6DD88 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.85□□□□□ -2.11
ATL3Q6DD88 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.85□□□□□ -2.11
ATL3Q6DD88 AL356010.1-201ENST00000456364 102 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 AC104564.1-201ENST00000493028 407 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 RNU6-237P-201ENST00000515985 71 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 RNU2-69P-201ENST00000516061 100 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 RN7SKP256-201ENST00000517201 314 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.85□□□□□ -2.11
ATL3Q6DD88 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.85□□□□□ -2.11
ATL3Q6DD88 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.85□□□□□ -2.11
ATL3Q6DD88 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.85□□□□□ -2.11
ATL3Q6DD88 ZNF680P1-201ENST00000436625 1469 ntBASIC1.85□□□□□ -2.11
ATL3Q6DD88 ELL2P3-201ENST00000457883 1602 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 RNA5SP276-201ENST00000362580 94 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 RNU6-611P-201ENST00000384276 104 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 RNU6-393P-201ENST00000384475 107 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 RNU6-903P-201ENST00000391270 109 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 RNA5SP450-201ENST00000411206 102 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 MTATP6P18-201ENST00000417994 673 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 BX510359.4-201ENST00000423750 193 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 MTND2P29-201ENST00000438595 412 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.84□□□□□ -2.11
ATL3Q6DD88 AL353752.1-201ENST00000454946 260 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 RNU6-956P-201ENST00000458868 103 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.84□□□□□ -2.11
ATL3Q6DD88 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.84□□□□□ -2.11
ATL3Q6DD88 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.84□□□□□ -2.11
ATL3Q6DD88 SNORA25.17-201ENST00000517184 124 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.84□□□□□ -2.11
ATL3Q6DD88 AP000873.5-201ENST00000533906 236 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.84□□□□□ -2.11
ATL3Q6DD88 AP005136.1-201ENST00000579765 429 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 AC068790.2-201ENST00000602601 557 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 MIR502-201ENST00000606349 86 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.84□□□□□ -2.11
ATL3Q6DD88 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ATL3Q6DD88 AC091834.1-201ENST00000614543 472 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 AC007792.1-201ENST00000623023 402 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 AC022418.1-201ENST00000624118 445 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 AC005609.4-201ENST00000625071 447 ntBASIC1.84□□□□□ -2.11
ATL3Q6DD88 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.12
ATL3Q6DD88 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.84□□□□□ -2.12
ATL3Q6DD88 RNU6-37P-201ENST00000362692 107 ntBASIC1.83□□□□□ -2.12
ATL3Q6DD88 RNU6-1210P-201ENST00000363775 107 ntBASIC1.83□□□□□ -2.12
ATL3Q6DD88 RNU6-11P-201ENST00000364234 107 ntBASIC1.83□□□□□ -2.12
ATL3Q6DD88 RNU5E-7P-201ENST00000365290 117 ntBASIC1.83□□□□□ -2.12
ATL3Q6DD88 RNU6-25P-201ENST00000383873 107 ntBASIC1.83□□□□□ -2.12
ATL3Q6DD88 RNU6-1-201ENST00000383898 107 ntBASIC1.83□□□□□ -2.12
ATL3Q6DD88 RNU6-48P-201ENST00000384161 107 ntBASIC1.83□□□□□ -2.12
ATL3Q6DD88 RNU6-36P-201ENST00000384172 107 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms