Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 SNORA54-201ENST00000384281 123 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 FTH1P15-201ENST00000406984 280 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 Y_RNA.594-201ENST00000410373 140 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 RNU6-1050P-201ENST00000410388 107 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 Y_RNA.646-201ENST00000410980 101 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.39□□□□□ -1.87
LONRF3Q496Y0 AL118496.2-201ENST00000448300 230 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 AL031274.1-201ENST00000450334 232 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.39□□□□□ -1.87
LONRF3Q496Y0 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.39□□□□□ -1.87
LONRF3Q496Y0 RPL23AP45-201ENST00000476406 468 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 MRPL42P6-201ENST00000486397 371 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 RN7SL283P-201ENST00000489055 303 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 AC018437.1-201ENST00000492214 406 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.39□□□□□ -1.87
LONRF3Q496Y0 Y_RNA.670-201ENST00000516255 105 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 AP004607.1-201ENST00000524456 203 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 AP003072.1-201ENST00000531740 145 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 AC020661.2-201ENST00000560114 134 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 AL080274.1-201ENST00000605565 220 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 AC019193.3-201ENST00000609144 554 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 PISRT1.1-201ENST00000616930 107 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 AC138627.2-201ENST00000624202 601 ntBASIC3.39□□□□□ -1.87
LONRF3Q496Y0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LONRF3Q496Y0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.39□□□□□ -1.87
LONRF3Q496Y0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.39□□□□□ -1.87
LONRF3Q496Y0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LONRF3Q496Y0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
LONRF3Q496Y0 AL359854.1-201ENST00000614203 1594 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.38□□□□□ -1.87
LONRF3Q496Y0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
LONRF3Q496Y0 AC008264.2-201ENST00000610193 3731 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LONRF3Q496Y0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.38□□□□□ -1.87
LONRF3Q496Y0 Y_RNA.132-201ENST00000363421 102 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 RNU6-72P-201ENST00000384285 79 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 MIR517A-201ENST00000385001 87 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 AL030996.1-201ENST00000411430 235 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 USP9YP30-201ENST00000430729 455 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.38□□□□□ -1.87
LONRF3Q496Y0 SNORD5.1-201ENST00000458800 75 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 AP004217.1-201ENST00000480579 346 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 RPL22P13-201ENST00000493291 347 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 SCARNA15.1-201ENST00000516384 125 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 Y_RNA.687-201ENST00000516558 91 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 AP002404.1-201ENST00000532005 451 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LONRF3Q496Y0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.38□□□□□ -1.87
LONRF3Q496Y0 AP000787.2-201ENST00000604432 568 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 AC244517.12-201ENST00000623581 663 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 AC134503.1-201ENST00000633048 54 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 MIR7157-201ENST00000635801 60 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LONRF3Q496Y0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
LONRF3Q496Y0 AC080128.1-201ENST00000474389 1917 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.38□□□□□ -1.87
LONRF3Q496Y0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
LONRF3Q496Y0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
LONRF3Q496Y0 MTND4P27-201ENST00000450813 1354 ntBASIC3.38□□□□□ -1.87
LONRF3Q496Y0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LONRF3Q496Y0 MIR22-201ENST00000362190 85 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 Y_RNA.128-201ENST00000363391 112 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 SNORA71.1-201ENST00000364523 117 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 Y_RNA.326-201ENST00000365176 113 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 RNU6-827P-201ENST00000365553 106 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 Y_RNA.404-201ENST00000383978 102 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 RNU6-474P-201ENST00000384243 107 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 SNORA11.2-201ENST00000408318 127 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 AL139281.1-201ENST00000422120 335 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.37□□□□□ -1.87
LONRF3Q496Y0 AC236972.1-201ENST00000433225 199 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 AC004383.1-201ENST00000438135 289 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 PCMTD1P1-201ENST00000455560 355 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 RPL7P42-201ENST00000481005 679 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 RPL36AP48-201ENST00000485521 314 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 AC097473.1-201ENST00000508142 408 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 AC023141.11-201ENST00000508864 202 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 RN7SKP272-201ENST00000516988 232 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.37□□□□□ -1.87
LONRF3Q496Y0 TRAV32-201ENST00000553993 340 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.37□□□□□ -1.87
LONRF3Q496Y0 AC011494.1-201ENST00000596454 237 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.37□□□□□ -1.87
LONRF3Q496Y0 Y_RNA.812-201ENST00000610788 101 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 Y_RNA.784-201ENST00000613803 101 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 AC133104.2-201ENST00000615272 193 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 Y_RNA.787-201ENST00000616522 101 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 Y_RNA.780-201ENST00000617336 101 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 Y_RNA.801-201ENST00000619005 101 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LONRF3Q496Y0 AL035425.3-201ENST00000564206 4996 ntBASIC3.37□□□□□ -1.87
LONRF3Q496Y0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LONRF3Q496Y0 AC009487.2-201ENST00000420969 6821 ntBASIC3.36□□□□□ -1.87
LONRF3Q496Y0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.36□□□□□ -1.87
LONRF3Q496Y0 MTND5P10-201ENST00000603719 1809 ntBASIC3.36□□□□□ -1.87
LONRF3Q496Y0 VTRNA1-1-201ENST00000363120 99 ntBASIC3.36□□□□□ -1.87
LONRF3Q496Y0 RNU6-1059P-201ENST00000363752 98 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms