Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 BTF3L4P2-201ENST00000392798 346 ntBASIC3.92□□□□□ -1.78
RTP1P59025 RN7SKP111-201ENST00000410349 271 ntBASIC3.92□□□□□ -1.78
RTP1P59025 RN7SKP53-201ENST00000411337 315 ntBASIC3.92□□□□□ -1.78
RTP1P59025 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.92□□□□□ -1.78
RTP1P59025 AL358453.1-201ENST00000422522 250 ntBASIC3.92□□□□□ -1.78
RTP1P59025 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.92□□□□□ -1.78
RTP1P59025 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.92□□□□□ -1.78
RTP1P59025 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.92□□□□□ -1.78
RTP1P59025 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.92□□□□□ -1.78
RTP1P59025 RNU6-496P-201ENST00000516145 99 ntBASIC3.92□□□□□ -1.78
RTP1P59025 RNU6-1231P-201ENST00000517185 103 ntBASIC3.92□□□□□ -1.78
RTP1P59025 AP006245.1-201ENST00000522549 120 ntBASIC3.92□□□□□ -1.78
RTP1P59025 MRPS36P4-201ENST00000534436 298 ntBASIC3.92□□□□□ -1.78
RTP1P59025 TRAV28-201ENST00000557548 323 ntBASIC3.92□□□□□ -1.78
RTP1P59025 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.92□□□□□ -1.78
RTP1P59025 MIR4659A-201ENST00000580269 81 ntBASIC3.92□□□□□ -1.78
RTP1P59025 AC136601.2-201ENST00000604356 474 ntBASIC3.92□□□□□ -1.78
RTP1P59025 uc_338.32-201ENST00000615087 172 ntBASIC3.92□□□□□ -1.78
RTP1P59025 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.92□□□□□ -1.78
RTP1P59025 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
RTP1P59025 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.92□□□□□ -1.78
RTP1P59025 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.92□□□□□ -1.78
RTP1P59025 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RTP1P59025 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RTP1P59025 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
RTP1P59025 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
RTP1P59025 AC007656.2-201ENST00000624902 4547 ntBASIC3.91□□□□□ -1.78
RTP1P59025 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RTP1P59025 RNU6-1301P-201ENST00000362724 104 ntBASIC3.91□□□□□ -1.78
RTP1P59025 Y_RNA.83-201ENST00000363005 113 ntBASIC3.91□□□□□ -1.78
RTP1P59025 RNU4-9P-201ENST00000364951 139 ntBASIC3.91□□□□□ -1.78
RTP1P59025 RNA5SP167-201ENST00000365461 116 ntBASIC3.91□□□□□ -1.78
RTP1P59025 RNU6-746P-201ENST00000384112 109 ntBASIC3.91□□□□□ -1.78
RTP1P59025 RNU6-102P-201ENST00000384485 104 ntBASIC3.91□□□□□ -1.78
RTP1P59025 SNORD78.2-201ENST00000391076 69 ntBASIC3.91□□□□□ -1.78
RTP1P59025 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.91□□□□□ -1.78
RTP1P59025 AC006028.1-201ENST00000438379 402 ntBASIC3.91□□□□□ -1.78
RTP1P59025 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
RTP1P59025 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.91□□□□□ -1.78
RTP1P59025 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.91□□□□□ -1.78
RTP1P59025 RPS26P21-201ENST00000475397 348 ntBASIC3.91□□□□□ -1.78
RTP1P59025 RNA5SP341-201ENST00000516261 117 ntBASIC3.91□□□□□ -1.78
RTP1P59025 SNORA31.8-201ENST00000516327 108 ntBASIC3.91□□□□□ -1.78
RTP1P59025 RNA5SP291-201ENST00000517222 105 ntBASIC3.91□□□□□ -1.78
RTP1P59025 IGKV2-26-201ENST00000518305 343 ntBASIC3.91□□□□□ -1.78
RTP1P59025 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RTP1P59025 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.91□□□□□ -1.78
RTP1P59025 MIR5004-201ENST00000579078 107 ntBASIC3.91□□□□□ -1.78
RTP1P59025 AC099506.2-201ENST00000623074 221 ntBASIC3.91□□□□□ -1.78
RTP1P59025 AC010733.2-201ENST00000589496 5702 ntBASIC3.91□□□□□ -1.78
RTP1P59025 AC233981.2-201ENST00000611524 1614 ntBASIC3.91□□□□□ -1.78
RTP1P59025 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTP1P59025 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
RTP1P59025 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
RTP1P59025 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RTP1P59025 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RTP1P59025 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RTP1P59025 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
RTP1P59025 AC007785.2-201ENST00000598627 1916 ntBASIC3.9□□□□□ -1.78
RTP1P59025 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RTP1P59025 RNU6-222P-201ENST00000362438 107 ntBASIC3.9□□□□□ -1.79
RTP1P59025 RNU6-105P-201ENST00000363909 104 ntBASIC3.9□□□□□ -1.79
RTP1P59025 SNORA80A-201ENST00000363922 136 ntBASIC3.9□□□□□ -1.79
RTP1P59025 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RTP1P59025 Y_RNA.793-201ENST00000411222 111 ntBASIC3.9□□□□□ -1.79
RTP1P59025 HMGN2P21-201ENST00000447764 270 ntBASIC3.9□□□□□ -1.79
RTP1P59025 snoU13.4-201ENST00000458916 104 ntBASIC3.9□□□□□ -1.79
RTP1P59025 Y_RNA.644-201ENST00000459006 113 ntBASIC3.9□□□□□ -1.79
RTP1P59025 RPL27AP5-201ENST00000469428 449 ntBASIC3.9□□□□□ -1.79
RTP1P59025 AC084357.1-201ENST00000473404 255 ntBASIC3.9□□□□□ -1.79
RTP1P59025 RN7SL429P-201ENST00000479090 223 ntBASIC3.9□□□□□ -1.79
RTP1P59025 RN7SL489P-201ENST00000486185 223 ntBASIC3.9□□□□□ -1.79
RTP1P59025 RN7SL327P-201ENST00000488659 223 ntBASIC3.9□□□□□ -1.79
RTP1P59025 RPL23AP75-201ENST00000491601 451 ntBASIC3.9□□□□□ -1.79
RTP1P59025 SERF1AP1-201ENST00000514575 187 ntBASIC3.9□□□□□ -1.79
RTP1P59025 Y_RNA.674-201ENST00000516362 113 ntBASIC3.9□□□□□ -1.79
RTP1P59025 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.9□□□□□ -1.79
RTP1P59025 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.9□□□□□ -1.79
RTP1P59025 U2.14-201ENST00000615943 113 ntBASIC3.9□□□□□ -1.79
RTP1P59025 RN7SL853P-201ENST00000617250 223 ntBASIC3.9□□□□□ -1.79
RTP1P59025 AC027309.3-201ENST00000623419 351 ntBASIC3.9□□□□□ -1.79
RTP1P59025 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.9□□□□□ -1.79
RTP1P59025 AC127459.3-201ENST00000624328 466 ntBASIC3.9□□□□□ -1.79
RTP1P59025 AC006504.1-201ENST00000562493 3666 ntBASIC3.9□□□□□ -1.79
RTP1P59025 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RTP1P59025 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.9□□□□□ -1.79
RTP1P59025 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
RTP1P59025 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.9□□□□□ -1.79
RTP1P59025 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RTP1P59025 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
RTP1P59025 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.89□□□□□ -1.79
RTP1P59025 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RTP1P59025 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RTP1P59025 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.89□□□□□ -1.79
RTP1P59025 RNA5SP31-201ENST00000411144 127 ntBASIC3.89□□□□□ -1.79
RTP1P59025 SNRPEP9-201ENST00000436794 238 ntBASIC3.89□□□□□ -1.79
RTP1P59025 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.89□□□□□ -1.79
RTP1P59025 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.89□□□□□ -1.79
RTP1P59025 RN7SKP272-201ENST00000516988 232 ntBASIC3.89□□□□□ -1.79
RTP1P59025 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms