Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 Y_RNA.597-201ENST00000410463 100 ntBASIC1.53□□□□□ -2.16
VSX2P58304 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.53□□□□□ -2.16
VSX2P58304 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.53□□□□□ -2.16
VSX2P58304 MTND5P17-201ENST00000418405 1603 ntBASIC1.53□□□□□ -2.16
VSX2P58304 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.53□□□□□ -2.16
VSX2P58304 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.53□□□□□ -2.16
VSX2P58304 AL365400.1-201ENST00000431854 640 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RPL23AP6-201ENST00000446637 472 ntBASIC1.53□□□□□ -2.16
VSX2P58304 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.53□□□□□ -2.16
VSX2P58304 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.53□□□□□ -2.16
VSX2P58304 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.53□□□□□ -2.16
VSX2P58304 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.53□□□□□ -2.16
VSX2P58304 AC074344.1-201ENST00000512823 224 ntBASIC1.53□□□□□ -2.16
VSX2P58304 AC117532.1-201ENST00000514638 323 ntBASIC1.53□□□□□ -2.16
VSX2P58304 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.53□□□□□ -2.16
VSX2P58304 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.53□□□□□ -2.16
VSX2P58304 AC022880.1-201ENST00000534017 973 ntBASIC1.53□□□□□ -2.16
VSX2P58304 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.53□□□□□ -2.16
VSX2P58304 LRRC34P1-201ENST00000542742 915 ntBASIC1.53□□□□□ -2.16
VSX2P58304 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.53□□□□□ -2.16
VSX2P58304 MIR4498-201ENST00000577599 66 ntBASIC1.53□□□□□ -2.16
VSX2P58304 AC026271.5-201ENST00000577873 130 ntBASIC1.53□□□□□ -2.16
VSX2P58304 AC243960.4-201ENST00000600532 288 ntBASIC1.53□□□□□ -2.16
VSX2P58304 AC064872.1-201ENST00000604823 1072 ntBASIC1.53□□□□□ -2.16
VSX2P58304 RNU6-6P-201ENST00000606623 107 ntBASIC1.53□□□□□ -2.16
VSX2P58304 AC138649.3-201ENST00000622154 254 ntBASIC1.53□□□□□ -2.16
VSX2P58304 Z69720.2-201ENST00000624755 279 ntBASIC1.53□□□□□ -2.16
VSX2P58304 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.53□□□□□ -2.16
VSX2P58304 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
VSX2P58304 RNU6-1287P-201ENST00000362914 107 ntBASIC1.52□□□□□ -2.17
VSX2P58304 RNU6-527P-201ENST00000363425 104 ntBASIC1.52□□□□□ -2.17
VSX2P58304 Y_RNA.324-201ENST00000365165 102 ntBASIC1.52□□□□□ -2.17
VSX2P58304 RNU6-611P-201ENST00000384276 104 ntBASIC1.52□□□□□ -2.17
VSX2P58304 RNU6-1060P-201ENST00000384664 107 ntBASIC1.52□□□□□ -2.17
VSX2P58304 MIR597-201ENST00000384968 97 ntBASIC1.52□□□□□ -2.17
VSX2P58304 RNU6-248P-201ENST00000410720 107 ntBASIC1.52□□□□□ -2.17
VSX2P58304 OR9R1P-201ENST00000412200 877 ntBASIC1.52□□□□□ -2.17
VSX2P58304 RPL23AP36-201ENST00000413895 458 ntBASIC1.52□□□□□ -2.17
VSX2P58304 AL158823.1-201ENST00000418441 478 ntBASIC1.52□□□□□ -2.17
VSX2P58304 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.52□□□□□ -2.17
VSX2P58304 MTCO2P34-201ENST00000421994 607 ntBASIC1.52□□□□□ -2.17
VSX2P58304 USP9YP18-201ENST00000425912 695 ntBASIC1.52□□□□□ -2.17
VSX2P58304 DNAJC19P4-201ENST00000440115 345 ntBASIC1.52□□□□□ -2.17
VSX2P58304 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.52□□□□□ -2.17
VSX2P58304 RPS29P15-201ENST00000458329 171 ntBASIC1.52□□□□□ -2.17
VSX2P58304 SNORD42A-201ENST00000459584 64 ntBASIC1.52□□□□□ -2.17
VSX2P58304 MTND1P22-201ENST00000510572 951 ntBASIC1.52□□□□□ -2.17
VSX2P58304 AC108729.3-201ENST00000513484 108 ntBASIC1.52□□□□□ -2.17
VSX2P58304 RNU5F-2P-201ENST00000516066 82 ntBASIC1.52□□□□□ -2.17
VSX2P58304 SNORA18.6-201ENST00000516792 115 ntBASIC1.52□□□□□ -2.17
VSX2P58304 AP005660.1-201ENST00000522972 293 ntBASIC1.52□□□□□ -2.17
VSX2P58304 AC022616.8-201ENST00000533569 253 ntBASIC1.52□□□□□ -2.17
VSX2P58304 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.52□□□□□ -2.17
VSX2P58304 SNORD53B-201ENST00000577887 78 ntBASIC1.52□□□□□ -2.17
VSX2P58304 AP001506.1-201ENST00000615444 211 ntBASIC1.52□□□□□ -2.17
VSX2P58304 AC091304.6-201ENST00000619761 202 ntBASIC1.52□□□□□ -2.17
VSX2P58304 AC023510.2-201ENST00000622162 746 ntBASIC1.52□□□□□ -2.17
VSX2P58304 AC007792.1-201ENST00000623023 402 ntBASIC1.52□□□□□ -2.17
VSX2P58304 AC008993.2-201ENST00000631744 806 ntBASIC1.52□□□□□ -2.17
VSX2P58304 U4.7-201ENST00000638126 106 ntBASIC1.52□□□□□ -2.17
VSX2P58304 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
VSX2P58304 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.51□□□□□ -2.17
VSX2P58304 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
VSX2P58304 MIR378A-201ENST00000362177 66 ntBASIC1.51□□□□□ -2.17
VSX2P58304 RNU5E-7P-201ENST00000365290 117 ntBASIC1.51□□□□□ -2.17
VSX2P58304 RNU6-1029P-201ENST00000384109 107 ntBASIC1.51□□□□□ -2.17
VSX2P58304 U8.10-201ENST00000384260 133 ntBASIC1.51□□□□□ -2.17
VSX2P58304 RNU11-3P-201ENST00000391111 133 ntBASIC1.51□□□□□ -2.17
VSX2P58304 RAP1BP3-201ENST00000407180 549 ntBASIC1.51□□□□□ -2.17
VSX2P58304 RNU6-387P-201ENST00000411331 105 ntBASIC1.51□□□□□ -2.17
VSX2P58304 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.51□□□□□ -2.17
VSX2P58304 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.51□□□□□ -2.17
VSX2P58304 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.51□□□□□ -2.17
VSX2P58304 RPS15AP10-201ENST00000432472 382 ntBASIC1.51□□□□□ -2.17
VSX2P58304 GPR143P-201ENST00000434155 205 ntBASIC1.51□□□□□ -2.17
VSX2P58304 AC243964.1-201ENST00000441814 261 ntBASIC1.51□□□□□ -2.17
VSX2P58304 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.51□□□□□ -2.17
VSX2P58304 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.51□□□□□ -2.17
VSX2P58304 AC079448.1-201ENST00000449377 373 ntBASIC1.51□□□□□ -2.17
VSX2P58304 SNRPGP9-201ENST00000456025 225 ntBASIC1.51□□□□□ -2.17
VSX2P58304 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.51□□□□□ -2.17
VSX2P58304 PTP4A1P4-201ENST00000512479 322 ntBASIC1.51□□□□□ -2.17
VSX2P58304 AC104136.1-201ENST00000512969 394 ntBASIC1.51□□□□□ -2.17
VSX2P58304 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.51□□□□□ -2.17
VSX2P58304 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.51□□□□□ -2.17
VSX2P58304 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.51□□□□□ -2.17
VSX2P58304 MIR3913-1-201ENST00000577744 102 ntBASIC1.51□□□□□ -2.17
VSX2P58304 AC023043.2-201ENST00000589678 1026 ntBASIC1.51□□□□□ -2.17
VSX2P58304 AC123912.5-201ENST00000605470 343 ntBASIC1.51□□□□□ -2.17
VSX2P58304 U6.114-201ENST00000636407 96 ntBASIC1.51□□□□□ -2.17
VSX2P58304 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VSX2P58304 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
VSX2P58304 RNU6-661P-201ENST00000362409 107 ntBASIC1.5□□□□□ -2.17
VSX2P58304 RNU6-428P-201ENST00000362942 107 ntBASIC1.5□□□□□ -2.17
VSX2P58304 U3.4-201ENST00000363352 213 ntBASIC1.5□□□□□ -2.17
VSX2P58304 Y_RNA.169-201ENST00000363745 96 ntBASIC1.5□□□□□ -2.17
VSX2P58304 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.5□□□□□ -2.17
VSX2P58304 MIR454-201ENST00000390180 115 ntBASIC1.5□□□□□ -2.17
VSX2P58304 AL513185.2-201ENST00000425543 193 ntBASIC1.5□□□□□ -2.17
VSX2P58304 AC010486.2-201ENST00000505572 483 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms