Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 USP9YP7-201ENST00000436723 430 ntBASIC3.23□□□□□ -1.89
HMGA2P52926 AL357134.1-201ENST00000445848 426 ntBASIC3.23□□□□□ -1.89
HMGA2P52926 HMGB3P8-201ENST00000449709 577 ntBASIC3.23□□□□□ -1.89
HMGA2P52926 USP9YP32-201ENST00000452432 430 ntBASIC3.23□□□□□ -1.89
HMGA2P52926 Y_RNA.637-201ENST00000459424 114 ntBASIC3.23□□□□□ -1.89
HMGA2P52926 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.23□□□□□ -1.89
HMGA2P52926 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
HMGA2P52926 RNU5E-3P-201ENST00000515913 68 ntBASIC3.23□□□□□ -1.89
HMGA2P52926 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.23□□□□□ -1.89
HMGA2P52926 AC087499.8-201ENST00000578406 226 ntBASIC3.23□□□□□ -1.89
HMGA2P52926 AC011603.4-201ENST00000611325 277 ntBASIC3.23□□□□□ -1.89
HMGA2P52926 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HMGA2P52926 AC112200.1-201ENST00000625015 234 ntBASIC3.23□□□□□ -1.89
HMGA2P52926 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.23□□□□□ -1.89
HMGA2P52926 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HMGA2P52926 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.23□□□□□ -1.89
HMGA2P52926 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.23□□□□□ -1.89
HMGA2P52926 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMGA2P52926 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
HMGA2P52926 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMGA2P52926 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMGA2P52926 MIR372-201ENST00000362225 67 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 RNU6-1272P-201ENST00000362776 107 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 snoU2_19.4-201ENST00000364329 80 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 Y_RNA.294-201ENST00000364916 102 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 RNU4-17P-201ENST00000365598 141 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 RNU6-805P-201ENST00000365643 106 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMGA2P52926 RNA5SP293-201ENST00000410527 113 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGA2P52926 AL031736.2-201ENST00000426573 787 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 BTF3P11-201ENST00000426582 477 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.22□□□□□ -1.89
HMGA2P52926 AC074290.1-201ENST00000448883 135 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.22□□□□□ -1.89
HMGA2P52926 RPL10P17-201ENST00000453852 316 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGA2P52926 RPL23AP75-201ENST00000491601 451 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 FCF1P8-201ENST00000510322 597 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.22□□□□□ -1.89
HMGA2P52926 RNA5SP471-201ENST00000516971 106 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 AC100767.1-201ENST00000528178 123 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.22□□□□□ -1.89
HMGA2P52926 AL391261.3-201ENST00000557194 520 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGA2P52926 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.22□□□□□ -1.89
HMGA2P52926 MTND5P34-201ENST00000568888 325 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 AC108081.1-201ENST00000604358 221 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 AL357075.2-201ENST00000614906 189 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMGA2P52926 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.22□□□□□ -1.89
HMGA2P52926 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMGA2P52926 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMGA2P52926 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.22□□□□□ -1.89
HMGA2P52926 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMGA2P52926 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMGA2P52926 ZNF204P-201ENST00000416749 2397 ntBASIC3.22□□□□□ -1.89
HMGA2P52926 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMGA2P52926 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HMGA2P52926 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HMGA2P52926 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.89
HMGA2P52926 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.21□□□□□ -1.89
HMGA2P52926 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
HMGA2P52926 AL513302.2-201ENST00000562313 1842 ntBASIC3.21□□□□□ -1.89
HMGA2P52926 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
HMGA2P52926 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMGA2P52926 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMGA2P52926 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.21□□□□□ -1.9
HMGA2P52926 RNU6-227P-201ENST00000362865 103 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 RN7SKP224-201ENST00000364140 325 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 RNU6-1164P-201ENST00000364428 107 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 SNORA73.2-201ENST00000364946 201 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 RNU6-339P-201ENST00000384310 107 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 Y_RNA.495-201ENST00000384435 112 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 MIR487A-201ENST00000385009 80 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 RNU1-139P-201ENST00000391307 165 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 MIR888-201ENST00000401186 77 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 RNY4P30-201ENST00000410216 95 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGA2P52926 AIMP1P2-201ENST00000425294 312 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 AC009296.1-201ENST00000443146 155 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 AC096638.1-201ENST00000444678 216 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGA2P52926 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HMGA2P52926 RNU6-762P-201ENST00000517107 102 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 SNORA31.22-201ENST00000517204 135 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 AC104027.1-201ENST00000521887 300 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 AC018442.3-201ENST00000523025 183 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGA2P52926 AC005476.1-201ENST00000554427 397 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGA2P52926 AL161629.2-201ENST00000615347 275 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 MIR6130-201ENST00000619419 109 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 AC006001.4-201ENST00000622243 395 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 AC073476.4-201ENST00000628409 72 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMGA2P52926 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMGA2P52926 AC007496.3-201ENST00000624987 3443 ntBASIC3.21□□□□□ -1.9
HMGA2P52926 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms