Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AL008629.1-201ENST00000438615 184 ntBASIC0.33□□□□□ -2.36
POLR2JP52435 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.33□□□□□ -2.36
POLR2JP52435 AL583843.1-201ENST00000456070 346 ntBASIC0.33□□□□□ -2.36
POLR2JP52435 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
POLR2JP52435 RNY4P37-201ENST00000516225 96 ntBASIC0.33□□□□□ -2.36
POLR2JP52435 RNA5SP121-201ENST00000516537 101 ntBASIC0.33□□□□□ -2.36
POLR2JP52435 SNORD60.2-201ENST00000516883 86 ntBASIC0.33□□□□□ -2.36
POLR2JP52435 MTCO3P15-201ENST00000526563 574 ntBASIC0.33□□□□□ -2.36
POLR2JP52435 AL590705.4-201ENST00000532209 134 ntBASIC0.33□□□□□ -2.36
POLR2JP52435 AC087897.1-201ENST00000550134 156 ntBASIC0.33□□□□□ -2.36
POLR2JP52435 AL157871.3-201ENST00000557231 293 ntBASIC0.33□□□□□ -2.36
POLR2JP52435 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.33□□□□□ -2.36
POLR2JP52435 AC105148.1-201ENST00000604961 409 ntBASIC0.33□□□□□ -2.36
POLR2JP52435 RNU6-87P-201ENST00000607561 108 ntBASIC0.33□□□□□ -2.36
POLR2JP52435 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.33□□□□□ -2.36
POLR2JP52435 MIR6788-201ENST00000618842 66 ntBASIC0.33□□□□□ -2.36
POLR2JP52435 AL359740.1-201ENST00000624340 592 ntBASIC0.33□□□□□ -2.36
POLR2JP52435 MTND5P33-201ENST00000571250 1450 ntBASIC0.33□□□□□ -2.36
POLR2JP52435 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
POLR2JP52435 RNU4-79P-201ENST00000362764 141 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 Y_RNA.191-201ENST00000363972 113 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 RNU6-289P-201ENST00000364093 107 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 RNU6-1235P-201ENST00000384559 107 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.32□□□□□ -2.36
POLR2JP52435 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.32□□□□□ -2.36
POLR2JP52435 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.32□□□□□ -2.36
POLR2JP52435 AC013262.1-201ENST00000426710 252 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 AC244023.1-201ENST00000426884 112 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 AL591212.2-201ENST00000433923 257 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.32□□□□□ -2.36
POLR2JP52435 AL158053.1-201ENST00000441503 453 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.32□□□□□ -2.36
POLR2JP52435 RNU6-498P-201ENST00000459468 107 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.32□□□□□ -2.36
POLR2JP52435 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.32□□□□□ -2.36
POLR2JP52435 AC024589.1-201ENST00000512207 263 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 SNORA31.2-201ENST00000516019 134 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 AC021451.1-201ENST00000523498 1129 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
POLR2JP52435 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.32□□□□□ -2.36
POLR2JP52435 MIR1273C-201ENST00000578669 77 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 MIR4781-201ENST00000585250 76 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 AC242498.1-201ENST00000604134 111 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 RPL21P136-201ENST00000605378 396 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 AC104465.1-201ENST00000611365 139 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 AC243994.1-201ENST00000618627 109 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 AC007792.1-201ENST00000623023 402 ntBASIC0.32□□□□□ -2.36
POLR2JP52435 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.32□□□□□ -2.36
POLR2JP52435 Y_RNA.33-201ENST00000362591 102 ntBASIC0.31□□□□□ -2.36
POLR2JP52435 RNA5SP259-201ENST00000365541 109 ntBASIC0.31□□□□□ -2.36
POLR2JP52435 MIR200A-201ENST00000384875 90 ntBASIC0.31□□□□□ -2.36
POLR2JP52435 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.31□□□□□ -2.36
POLR2JP52435 RAB28P5-201ENST00000427490 651 ntBASIC0.31□□□□□ -2.36
POLR2JP52435 SNRPEP8-201ENST00000442866 260 ntBASIC0.31□□□□□ -2.36
POLR2JP52435 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.31□□□□□ -2.36
POLR2JP52435 MTND1P16-201ENST00000465177 898 ntBASIC0.31□□□□□ -2.36
POLR2JP52435 RNU6-914P-201ENST00000516749 109 ntBASIC0.31□□□□□ -2.36
POLR2JP52435 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.31□□□□□ -2.36
POLR2JP52435 DEFB131D-201ENST00000526803 184 ntBASIC0.31□□□□□ -2.36
POLR2JP52435 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.31□□□□□ -2.36
POLR2JP52435 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.31□□□□□ -2.36
POLR2JP52435 MIR5708-201ENST00000579723 85 ntBASIC0.31□□□□□ -2.36
POLR2JP52435 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.31□□□□□ -2.36
POLR2JP52435 AP001596.2-201ENST00000608410 312 ntBASIC0.31□□□□□ -2.36
POLR2JP52435 AC023158.2-201ENST00000614876 543 ntBASIC0.31□□□□□ -2.36
POLR2JP52435 MIR5087-201ENST00000635826 76 ntBASIC0.31□□□□□ -2.36
POLR2JP52435 MTND5P42-201ENST00000637720 498 ntBASIC0.31□□□□□ -2.36
POLR2JP52435 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.31□□□□□ -2.36
POLR2JP52435 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.31□□□□□ -2.36
POLR2JP52435 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.3□□□□□ -2.36
POLR2JP52435 AL391994.1-201ENST00000254724 282 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 OR4G2P-201ENST00000328113 903 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 RNU6-853P-201ENST00000364306 107 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 SNORA4.2-201ENST00000365313 147 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.3□□□□□ -2.36
POLR2JP52435 SNORD12-201ENST00000391002 90 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 SNORA12-201ENST00000391162 147 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 UBE2V1P15-201ENST00000407776 448 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.3□□□□□ -2.36
POLR2JP52435 AC048334.1-201ENST00000477975 159 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 AC005741.1-201ENST00000511094 432 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 MTCO3P28-201ENST00000513351 515 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.3□□□□□ -2.36
POLR2JP52435 BNIP3P6-201ENST00000549284 499 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 MIR5000-201ENST00000577717 103 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 MIR4452-201ENST00000583004 71 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 MIR151B-201ENST00000584249 96 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 BNIP3P8-201ENST00000597863 560 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 AC090186.1-201ENST00000605991 572 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.3□□□□□ -2.36
POLR2JP52435 PCMTD1P7-201ENST00000634506 357 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 ELL2P3-201ENST00000457883 1602 ntBASIC0.3□□□□□ -2.36
POLR2JP52435 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
POLR2JP52435 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
POLR2JP52435 SNORD3E-201ENST00000362899 217 ntBASIC0.29□□□□□ -2.36
POLR2JP52435 U3.8-201ENST00000363675 217 ntBASIC0.29□□□□□ -2.36
POLR2JP52435 RNU6-777P-201ENST00000364265 104 ntBASIC0.29□□□□□ -2.36
POLR2JP52435 RNU4-12P-201ENST00000365233 139 ntBASIC0.29□□□□□ -2.36
POLR2JP52435 Y_RNA.363-201ENST00000365529 113 ntBASIC0.29□□□□□ -2.36
POLR2JP52435 RNU6-110P-201ENST00000384508 104 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms