Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.58□□□□□ -2.16
CX3CR1P49238 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.58□□□□□ -2.16
CX3CR1P49238 ELL2P3-201ENST00000457883 1602 ntBASIC1.58□□□□□ -2.16
CX3CR1P49238 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
CX3CR1P49238 RNU1-58P-201ENST00000362413 163 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 RNU6-78P-201ENST00000362897 107 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 RNU6-1287P-201ENST00000362914 107 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 RNU6-234P-201ENST00000365229 104 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 RNU4-48P-201ENST00000365559 182 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 RNU6-1127P-201ENST00000384580 107 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 RNU6-1060P-201ENST00000384664 107 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CX3CR1P49238 SNORA16.2-201ENST00000390991 127 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 RNA5SP501-201ENST00000410990 112 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 RNU6-387P-201ENST00000411331 105 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 OR9R1P-201ENST00000412200 877 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.57□□□□□ -2.16
CX3CR1P49238 AL353193.1-201ENST00000421444 268 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 EIF4EP2-201ENST00000422816 654 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.57□□□□□ -2.16
CX3CR1P49238 RPL39P29-201ENST00000447779 157 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 MTND1P27-201ENST00000451117 902 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 AL122001.1-201ENST00000457027 370 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.57□□□□□ -2.16
CX3CR1P49238 RNU7-182P-201ENST00000459009 62 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 TRBV12-1-201ENST00000479785 344 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.57□□□□□ -2.16
CX3CR1P49238 AC010424.1-201ENST00000506336 297 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 AC107393.1-201ENST00000512403 346 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CX3CR1P49238 MTCO2P4-201ENST00000517968 247 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.57□□□□□ -2.16
CX3CR1P49238 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.57□□□□□ -2.16
CX3CR1P49238 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.57□□□□□ -2.16
CX3CR1P49238 SUB1P2-201ENST00000556401 297 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 MIR3618-201ENST00000580330 88 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 MIR4713-201ENST00000582691 75 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 AC010620.1-201ENST00000601088 1102 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 U1.36-201ENST00000620684 176 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 AC097372.5-201ENST00000623665 376 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 AC009161.2-201ENST00000624626 138 ntBASIC1.57□□□□□ -2.16
CX3CR1P49238 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CX3CR1P49238 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
CX3CR1P49238 ZNF680P1-201ENST00000436625 1469 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CX3CR1P49238 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 DEFB108C-201ENST00000400154 252 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 AL079342.1-201ENST00000401460 267 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 RPL31P63-201ENST00000422565 375 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 UBE2V1P4-201ENST00000425374 344 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 RPS15AP10-201ENST00000432472 382 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.56□□□□□ -2.16
CX3CR1P49238 AC007969.2-201ENST00000441891 191 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.56□□□□□ -2.16
CX3CR1P49238 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.56□□□□□ -2.16
CX3CR1P49238 AL360221.1-201ENST00000445989 335 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.56□□□□□ -2.16
CX3CR1P49238 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 RNU6-956P-201ENST00000458868 103 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 RPS29P21-201ENST00000496272 170 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.56□□□□□ -2.16
CX3CR1P49238 AC079140.3-201ENST00000511111 550 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.56□□□□□ -2.16
CX3CR1P49238 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.56□□□□□ -2.16
CX3CR1P49238 Y_RNA.688-201ENST00000516565 95 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 RN7SKP219-201ENST00000516825 296 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 RNA5SP503-201ENST00000517047 117 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.56□□□□□ -2.16
CX3CR1P49238 AP002963.1-201ENST00000530590 184 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 AL356057.1-201ENST00000533798 831 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.56□□□□□ -2.16
CX3CR1P49238 AC110588.1-201ENST00000559699 137 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 AC006362.1-201ENST00000567392 174 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 AC022254.1-201ENST00000567857 235 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.56□□□□□ -2.16
CX3CR1P49238 MTATP6P3-201ENST00000581686 676 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 AL136363.2-201ENST00000604173 851 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 AC103810.8-201ENST00000607347 118 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.56□□□□□ -2.16
CX3CR1P49238 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.56□□□□□ -2.16
CX3CR1P49238 Z69720.2-201ENST00000624755 279 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 MIR1248-201ENST00000629190 106 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 SEPT14P19-203ENST00000633205 211 ntBASIC1.56□□□□□ -2.16
CX3CR1P49238 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CX3CR1P49238 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
CX3CR1P49238 RNU5E-7P-201ENST00000365290 117 ntBASIC1.55□□□□□ -2.16
CX3CR1P49238 MTCO2P19-201ENST00000427513 598 ntBASIC1.55□□□□□ -2.16
CX3CR1P49238 AL591043.1-201ENST00000432461 424 ntBASIC1.55□□□□□ -2.16
CX3CR1P49238 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.55□□□□□ -2.16
CX3CR1P49238 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.55□□□□□ -2.16
CX3CR1P49238 PPP1R2P5-201ENST00000457256 603 ntBASIC1.55□□□□□ -2.16
CX3CR1P49238 SNORA59A-201ENST00000459326 152 ntBASIC1.55□□□□□ -2.16
CX3CR1P49238 RPS29P11-201ENST00000496507 171 ntBASIC1.55□□□□□ -2.16
CX3CR1P49238 AC093259.1-201ENST00000509755 300 ntBASIC1.55□□□□□ -2.16
CX3CR1P49238 AC009646.1-201ENST00000510455 318 ntBASIC1.55□□□□□ -2.16
CX3CR1P49238 RNU2-69P-201ENST00000516061 100 ntBASIC1.55□□□□□ -2.16
CX3CR1P49238 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.55□□□□□ -2.16
CX3CR1P49238 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.55□□□□□ -2.16
CX3CR1P49238 AGGF1P4-201ENST00000568249 801 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms