Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 IPO5P1-202ENST00000600039 287 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 MIR4496-201ENST00000635896 61 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CHRNA4P43681 AC016588.2-201ENST00000632484 3021 ntBASIC4.19□□□□□ -1.74
CHRNA4P43681 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.18□□□□□ -1.74
CHRNA4P43681 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.18□□□□□ -1.74
CHRNA4P43681 AC011266.1-201ENST00000624119 3569 ntBASIC4.18□□□□□ -1.74
CHRNA4P43681 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CHRNA4P43681 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA4P43681 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA4P43681 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA4P43681 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA4P43681 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA4P43681 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CHRNA4P43681 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.18□□□□□ -1.74
CHRNA4P43681 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA4P43681 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CHRNA4P43681 RNU6-554P-201ENST00000410466 106 ntBASIC4.18□□□□□ -1.74
CHRNA4P43681 RNU4-43P-201ENST00000410628 137 ntBASIC4.18□□□□□ -1.74
CHRNA4P43681 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.18□□□□□ -1.74
CHRNA4P43681 AC091390.3-201ENST00000426478 338 ntBASIC4.18□□□□□ -1.74
CHRNA4P43681 RPL23AP46-201ENST00000438548 490 ntBASIC4.18□□□□□ -1.74
CHRNA4P43681 RPL7AP28-201ENST00000464513 571 ntBASIC4.18□□□□□ -1.74
CHRNA4P43681 RN7SL585P-201ENST00000470538 280 ntBASIC4.18□□□□□ -1.74
CHRNA4P43681 RNU2-12P-201ENST00000517216 168 ntBASIC4.18□□□□□ -1.74
CHRNA4P43681 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.18□□□□□ -1.74
CHRNA4P43681 AC006380.1-201ENST00000603598 186 ntBASIC4.18□□□□□ -1.74
CHRNA4P43681 AL356157.2-201ENST00000605122 111 ntBASIC4.18□□□□□ -1.74
CHRNA4P43681 SNX18P1Y-201ENST00000616231 511 ntBASIC4.18□□□□□ -1.74
CHRNA4P43681 MIR3674-201ENST00000636576 68 ntBASIC4.18□□□□□ -1.74
CHRNA4P43681 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA4P43681 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA4P43681 AL133243.3-201ENST00000617415 3004 ntBASIC4.18□□□□□ -1.74
CHRNA4P43681 AC099654.7-201ENST00000635788 2127 ntBASIC4.18□□□□□ -1.74
CHRNA4P43681 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHRNA4P43681 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.17□□□□□ -1.74
CHRNA4P43681 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.17□□□□□ -1.74
CHRNA4P43681 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
CHRNA4P43681 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.17□□□□□ -1.74
CHRNA4P43681 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHRNA4P43681 Y_RNA.114-201ENST00000363265 113 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 Y_RNA.179-201ENST00000363844 90 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 MIR548A1-201ENST00000385041 97 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 U3.40-201ENST00000408706 208 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 RN7SKP53-201ENST00000411337 315 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 AC096649.2-201ENST00000416186 393 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 AC006011.1-201ENST00000442758 349 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 ANP32BP2-201ENST00000454525 545 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 RNA5SP246-201ENST00000458909 119 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 snoU13.3-201ENST00000459441 104 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 RPS20P22-201ENST00000473700 357 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 SNORA43.2-201ENST00000516652 128 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 AC006199.1-201ENST00000548728 219 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.17□□□□□ -1.74
CHRNA4P43681 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.17□□□□□ -1.74
CHRNA4P43681 MIR3939-201ENST00000582614 106 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.17□□□□□ -1.74
CHRNA4P43681 AP001318.4-201ENST00000616637 121 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 MIR7151-201ENST00000617477 60 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 MIR7702-201ENST00000621931 59 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.17□□□□□ -1.74
CHRNA4P43681 AL139811.1-201ENST00000424779 2299 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHRNA4P43681 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.17□□□□□ -1.74
CHRNA4P43681 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.17□□□□□ -1.74
CHRNA4P43681 AL356489.2-201ENST00000566968 3528 ntBASIC4.17□□□□□ -1.74
CHRNA4P43681 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
CHRNA4P43681 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CHRNA4P43681 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.16□□□□□ -1.74
CHRNA4P43681 AC138915.1-201ENST00000565427 1685 ntBASIC4.16□□□□□ -1.74
CHRNA4P43681 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.16□□□□□ -1.74
CHRNA4P43681 RNU6-766P-201ENST00000362478 107 ntBASIC4.16□□□□□ -1.74
CHRNA4P43681 RNU6-324P-201ENST00000363957 106 ntBASIC4.16□□□□□ -1.74
CHRNA4P43681 Y_RNA.229-201ENST00000364347 113 ntBASIC4.16□□□□□ -1.74
CHRNA4P43681 Y_RNA.245-201ENST00000364493 95 ntBASIC4.16□□□□□ -1.74
CHRNA4P43681 RNU6-356P-201ENST00000384140 107 ntBASIC4.16□□□□□ -1.74
CHRNA4P43681 Y_RNA.617-201ENST00000410920 90 ntBASIC4.16□□□□□ -1.74
CHRNA4P43681 RPL23AP70-201ENST00000483361 460 ntBASIC4.16□□□□□ -1.74
CHRNA4P43681 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.16□□□□□ -1.74
CHRNA4P43681 AP003730.1-201ENST00000524605 285 ntBASIC4.16□□□□□ -1.74
CHRNA4P43681 RN7SL600P-201ENST00000581811 299 ntBASIC4.16□□□□□ -1.74
CHRNA4P43681 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.16□□□□□ -1.74
CHRNA4P43681 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHRNA4P43681 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CHRNA4P43681 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.16□□□□□ -1.74
CHRNA4P43681 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CHRNA4P43681 AC022893.2-201ENST00000564832 3296 ntBASIC4.16□□□□□ -1.74
CHRNA4P43681 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CHRNA4P43681 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHRNA4P43681 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHRNA4P43681 MARK2P15-201ENST00000432204 2186 ntBASIC4.16□□□□□ -1.74
CHRNA4P43681 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.16□□□□□ -1.74
CHRNA4P43681 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.16□□□□□ -1.74
CHRNA4P43681 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
CHRNA4P43681 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.15□□□□□ -1.74
CHRNA4P43681 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
CHRNA4P43681 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CHRNA4P43681 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.74
CHRNA4P43681 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.15□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms