Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 RNU6-87P-201ENST00000607561 108 ntBASIC0.42□□□□□ -2.34
SDC4P31431 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.42□□□□□ -2.34
SDC4P31431 AC243829.3-201ENST00000622177 108 ntBASIC0.42□□□□□ -2.34
SDC4P31431 AC112204.3-201ENST00000623822 332 ntBASIC0.42□□□□□ -2.34
SDC4P31431 MIR5087-201ENST00000635826 76 ntBASIC0.42□□□□□ -2.34
SDC4P31431 ELL2P3-201ENST00000457883 1602 ntBASIC0.42□□□□□ -2.34
SDC4P31431 RNU6-744P-201ENST00000365557 107 ntBASIC0.41□□□□□ -2.34
SDC4P31431 RNU6-1316P-201ENST00000384242 108 ntBASIC0.41□□□□□ -2.34
SDC4P31431 AC068533.2-201ENST00000411872 306 ntBASIC0.41□□□□□ -2.34
SDC4P31431 AC063976.4-201ENST00000421971 163 ntBASIC0.41□□□□□ -2.34
SDC4P31431 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.41□□□□□ -2.34
SDC4P31431 AC013262.1-201ENST00000426710 252 ntBASIC0.41□□□□□ -2.34
SDC4P31431 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.41□□□□□ -2.34
SDC4P31431 LARP1BP3-201ENST00000437229 869 ntBASIC0.41□□□□□ -2.34
SDC4P31431 snoU13.27-201ENST00000459278 104 ntBASIC0.41□□□□□ -2.34
SDC4P31431 AC005741.1-201ENST00000511094 432 ntBASIC0.41□□□□□ -2.34
SDC4P31431 RNA5SP168-201ENST00000516642 112 ntBASIC0.41□□□□□ -2.34
SDC4P31431 RN7SKP49-201ENST00000516675 260 ntBASIC0.41□□□□□ -2.34
SDC4P31431 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.41□□□□□ -2.34
SDC4P31431 AC060771.1-201ENST00000582031 164 ntBASIC0.41□□□□□ -2.34
SDC4P31431 AL358072.1-201ENST00000604156 575 ntBASIC0.41□□□□□ -2.34
SDC4P31431 RMST_2.1-201ENST00000617263 136 ntBASIC0.41□□□□□ -2.34
SDC4P31431 AL159153.1-201ENST00000619688 317 ntBASIC0.41□□□□□ -2.34
SDC4P31431 AL512643.1-201ENST00000635735 524 ntBASIC0.41□□□□□ -2.34
SDC4P31431 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.34
SDC4P31431 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.4□□□□□ -2.35
SDC4P31431 RNA5SP361-201ENST00000362686 118 ntBASIC0.4□□□□□ -2.35
SDC4P31431 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.4□□□□□ -2.35
SDC4P31431 RNU6-1-201ENST00000383898 107 ntBASIC0.4□□□□□ -2.35
SDC4P31431 SNORA75B-201ENST00000384053 137 ntBASIC0.4□□□□□ -2.35
SDC4P31431 RNU6-42P-201ENST00000384165 107 ntBASIC0.4□□□□□ -2.35
SDC4P31431 RNU6-36P-201ENST00000384172 107 ntBASIC0.4□□□□□ -2.35
SDC4P31431 RNU6-4P-201ENST00000384205 107 ntBASIC0.4□□□□□ -2.35
SDC4P31431 RNU6-5P-201ENST00000384238 107 ntBASIC0.4□□□□□ -2.35
SDC4P31431 RNU6-3P-201ENST00000384314 107 ntBASIC0.4□□□□□ -2.35
SDC4P31431 RNU6-2-201ENST00000384627 107 ntBASIC0.4□□□□□ -2.35
SDC4P31431 RNU6-9-201ENST00000384776 107 ntBASIC0.4□□□□□ -2.35
SDC4P31431 RNU6-33P-201ENST00000384793 107 ntBASIC0.4□□□□□ -2.35
SDC4P31431 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.4□□□□□ -2.35
SDC4P31431 AC069257.2-201ENST00000441819 155 ntBASIC0.4□□□□□ -2.35
SDC4P31431 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.4□□□□□ -2.35
SDC4P31431 AC079776.3-201ENST00000450665 370 ntBASIC0.4□□□□□ -2.35
SDC4P31431 RNU6-1132P-201ENST00000459214 107 ntBASIC0.4□□□□□ -2.35
SDC4P31431 snoU109.2-201ENST00000459316 135 ntBASIC0.4□□□□□ -2.35
SDC4P31431 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
SDC4P31431 SNORA31.4-201ENST00000516049 129 ntBASIC0.4□□□□□ -2.35
SDC4P31431 RNU6-1315P-201ENST00000517187 99 ntBASIC0.4□□□□□ -2.35
SDC4P31431 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.4□□□□□ -2.35
SDC4P31431 MIR4293-201ENST00000584305 78 ntBASIC0.4□□□□□ -2.35
SDC4P31431 AC022432.1-201ENST00000595739 310 ntBASIC0.4□□□□□ -2.35
SDC4P31431 RNU6-6P-201ENST00000606623 107 ntBASIC0.4□□□□□ -2.35
SDC4P31431 AC104465.1-201ENST00000611365 139 ntBASIC0.4□□□□□ -2.35
SDC4P31431 AL391994.1-201ENST00000254724 282 ntBASIC0.39□□□□□ -2.35
SDC4P31431 RNU4-79P-201ENST00000362764 141 ntBASIC0.39□□□□□ -2.35
SDC4P31431 SNORD18A-201ENST00000363753 72 ntBASIC0.39□□□□□ -2.35
SDC4P31431 SNORA4.3-201ENST00000365564 137 ntBASIC0.39□□□□□ -2.35
SDC4P31431 RNU6-16P-201ENST00000384385 107 ntBASIC0.39□□□□□ -2.35
SDC4P31431 FCF1P10-201ENST00000407590 479 ntBASIC0.39□□□□□ -2.35
SDC4P31431 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.39□□□□□ -2.35
SDC4P31431 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.39□□□□□ -2.35
SDC4P31431 AL008629.1-201ENST00000438615 184 ntBASIC0.39□□□□□ -2.35
SDC4P31431 MTND4P25-201ENST00000441039 533 ntBASIC0.39□□□□□ -2.35
SDC4P31431 NEFMP1-201ENST00000443423 1006 ntBASIC0.39□□□□□ -2.35
SDC4P31431 RNU6-953P-201ENST00000459154 107 ntBASIC0.39□□□□□ -2.35
SDC4P31431 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.39□□□□□ -2.35
SDC4P31431 RNU6-496P-201ENST00000516145 99 ntBASIC0.39□□□□□ -2.35
SDC4P31431 RNY4P37-201ENST00000516225 96 ntBASIC0.39□□□□□ -2.35
SDC4P31431 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.39□□□□□ -2.35
SDC4P31431 AC025423.5-201ENST00000550230 219 ntBASIC0.39□□□□□ -2.35
SDC4P31431 AC092325.1-201ENST00000566449 554 ntBASIC0.39□□□□□ -2.35
SDC4P31431 AC104072.1-201ENST00000568817 668 ntBASIC0.39□□□□□ -2.35
SDC4P31431 VN1R82P-201ENST00000601481 356 ntBASIC0.39□□□□□ -2.35
SDC4P31431 AC004987.4-201ENST00000603383 338 ntBASIC0.39□□□□□ -2.35
SDC4P31431 AC022709.1-201ENST00000615967 87 ntBASIC0.39□□□□□ -2.35
SDC4P31431 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.39□□□□□ -2.35
SDC4P31431 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.39□□□□□ -2.35
SDC4P31431 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.38□□□□□ -2.35
SDC4P31431 RNU5B-1-201ENST00000363286 116 ntBASIC0.38□□□□□ -2.35
SDC4P31431 Y_RNA.124-201ENST00000363339 93 ntBASIC0.38□□□□□ -2.35
SDC4P31431 Y_RNA.354-201ENST00000365448 111 ntBASIC0.38□□□□□ -2.35
SDC4P31431 RNU6-701P-201ENST00000384059 107 ntBASIC0.38□□□□□ -2.35
SDC4P31431 Y_RNA.534-201ENST00000384599 112 ntBASIC0.38□□□□□ -2.35
SDC4P31431 RAP1BP3-201ENST00000407180 549 ntBASIC0.38□□□□□ -2.35
SDC4P31431 RNU6-1025P-201ENST00000410629 104 ntBASIC0.38□□□□□ -2.35
SDC4P31431 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.38□□□□□ -2.35
SDC4P31431 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.38□□□□□ -2.35
SDC4P31431 AC024589.1-201ENST00000512207 263 ntBASIC0.38□□□□□ -2.35
SDC4P31431 RNU6-64P-201ENST00000517119 105 ntBASIC0.38□□□□□ -2.35
SDC4P31431 AC091163.3-201ENST00000518269 1144 ntBASIC0.38□□□□□ -2.35
SDC4P31431 AC104417.1-201ENST00000523974 751 ntBASIC0.38□□□□□ -2.35
SDC4P31431 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.38□□□□□ -2.35
SDC4P31431 SNORA59B-202ENST00000578183 701 ntBASIC0.38□□□□□ -2.35
SDC4P31431 MIR4711-201ENST00000578274 70 ntBASIC0.38□□□□□ -2.35
SDC4P31431 AL445435.1-201ENST00000604232 665 ntBASIC0.38□□□□□ -2.35
SDC4P31431 AL355816.2-201ENST00000610049 647 ntBASIC0.38□□□□□ -2.35
SDC4P31431 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.38□□□□□ -2.35
SDC4P31431 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.37□□□□□ -2.35
SDC4P31431 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
SDC4P31431 RNU6-289P-201ENST00000364093 107 ntBASIC0.37□□□□□ -2.35
SDC4P31431 SNORA50A-201ENST00000384225 134 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms