Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC005296.1-201ENST00000616145 209 ntBASIC1.97□□□□□ -2.09
PTPN6P29350 AL159153.1-201ENST00000619688 317 ntBASIC1.97□□□□□ -2.09
PTPN6P29350 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.97□□□□□ -2.09
PTPN6P29350 ZNF702P-202ENST00000434269 1966 ntBASIC1.97□□□□□ -2.09
PTPN6P29350 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
PTPN6P29350 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.97□□□□□ -2.09
PTPN6P29350 AC092881.1-201ENST00000638218 2733 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 RNU6-546P-201ENST00000383991 107 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 SNORD116-9-201ENST00000384000 95 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 SNORD116-3-201ENST00000384287 95 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 SNORD116-7-201ENST00000384404 95 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 SNORD116-5-201ENST00000384462 95 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
PTPN6P29350 RNU6-903P-201ENST00000391270 109 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 AC068050.1-201ENST00000394891 380 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 RNU6-293P-201ENST00000411259 106 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 AL139156.1-201ENST00000412785 841 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 SNORD56-201ENST00000413522 71 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 CDK8P2-201ENST00000415020 547 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 AL158823.1-201ENST00000418441 478 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 MTCYBP8-201ENST00000422855 651 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 SRIP2-201ENST00000428470 166 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.96□□□□□ -2.1
PTPN6P29350 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.96□□□□□ -2.1
PTPN6P29350 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.96□□□□□ -2.1
PTPN6P29350 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.96□□□□□ -2.1
PTPN6P29350 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.96□□□□□ -2.1
PTPN6P29350 AC245102.2-201ENST00000448956 180 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 AL353752.1-201ENST00000454946 260 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.96□□□□□ -2.1
PTPN6P29350 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.96□□□□□ -2.1
PTPN6P29350 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.96□□□□□ -2.1
PTPN6P29350 AC004223.2-201ENST00000590309 544 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 AC123912.5-201ENST00000605470 343 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 AC002044.1-201ENST00000606707 158 ntBASIC1.96□□□□□ -2.1
PTPN6P29350 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.96□□□□□ -2.1
PTPN6P29350 RNU6-996P-201ENST00000365438 107 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 RNU6-1103P-201ENST00000384150 107 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 SNORA64-201ENST00000384674 134 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 MIR518A2-201ENST00000384966 87 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 MIR29C-201ENST00000385231 88 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 RN7SKP32-201ENST00000410167 303 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 RNU4-26P-201ENST00000410270 107 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.95□□□□□ -2.1
PTPN6P29350 AL590556.1-201ENST00000423231 483 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 USP9YP18-201ENST00000425912 695 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 AL451074.3-201ENST00000437709 472 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.95□□□□□ -2.1
PTPN6P29350 RPL23AP6-201ENST00000446637 472 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 RPL23AP3-201ENST00000453844 468 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
PTPN6P29350 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.95□□□□□ -2.1
PTPN6P29350 AC079140.3-201ENST00000511111 550 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.95□□□□□ -2.1
PTPN6P29350 AC069113.1-201ENST00000517763 267 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 AC115990.1-201ENST00000526957 301 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 HIF1AP1-201ENST00000553642 175 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 MIR3941-201ENST00000582572 103 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 AC008749.1-201ENST00000597650 306 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 AC243960.4-201ENST00000600532 288 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 AL391646.1-201ENST00000603860 190 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 AC004908.3-201ENST00000610248 625 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
PTPN6P29350 CENPCP1-201ENST00000533085 2578 ntBASIC1.95□□□□□ -2.1
PTPN6P29350 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PTPN6P29350 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
PTPN6P29350 Y_RNA.1-201ENST00000352915 104 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 RNU6-944P-201ENST00000364023 107 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 RNU6-266P-201ENST00000364225 107 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 Y_RNA.399-201ENST00000383955 105 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 AL356432.1-201ENST00000405809 419 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 AC243964.1-201ENST00000441814 261 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 AL031274.1-201ENST00000450334 232 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.94□□□□□ -2.1
PTPN6P29350 SNRPGP7-201ENST00000469016 106 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 HMGB1P29-201ENST00000505659 499 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 RNU6-237P-201ENST00000515985 71 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 RNU1-40P-201ENST00000516816 164 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 RNU1-97P-201ENST00000516872 164 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 SNORA25.17-201ENST00000517184 124 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 AC022880.1-201ENST00000534017 973 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 MTCO3P23-201ENST00000561363 289 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 AGGF1P4-201ENST00000568249 801 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 MIR4524B-201ENST00000581569 115 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 MIR3611-201ENST00000584484 83 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 AC012507.3-201ENST00000603556 477 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 AC009314.1-201ENST00000603871 304 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 AC107304.1-201ENST00000604229 296 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 AP001596.2-201ENST00000608410 312 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.94□□□□□ -2.1
PTPN6P29350 U2.17-201ENST00000611454 95 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.94□□□□□ -2.1
PTPN6P29350 AC063943.3-201ENST00000615562 356 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 AL354950.2-201ENST00000617939 290 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 AC009509.4-201ENST00000619202 509 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 MIR219B-201ENST00000637023 88 ntBASIC1.94□□□□□ -2.1
PTPN6P29350 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PTPN6P29350 RNU6-428P-201ENST00000362942 107 ntBASIC1.93□□□□□ -2.1
PTPN6P29350 RNU6-1042P-201ENST00000384204 107 ntBASIC1.93□□□□□ -2.1
PTPN6P29350 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms