Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AP005660.1-201ENST00000522972 293 ntBASIC1.31□□□□□ -2.2
HLA-DMAP28067 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.31□□□□□ -2.2
HLA-DMAP28067 AC091544.4-201ENST00000555268 342 ntBASIC1.31□□□□□ -2.2
HLA-DMAP28067 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.31□□□□□ -2.2
HLA-DMAP28067 MIR4648-201ENST00000580107 72 ntBASIC1.31□□□□□ -2.2
HLA-DMAP28067 MIR5692A1-201ENST00000580523 69 ntBASIC1.31□□□□□ -2.2
HLA-DMAP28067 PRR13P7-201ENST00000605538 430 ntBASIC1.31□□□□□ -2.2
HLA-DMAP28067 RNU6-6P-201ENST00000606623 107 ntBASIC1.31□□□□□ -2.2
HLA-DMAP28067 AC091931.1-201ENST00000623488 728 ntBASIC1.31□□□□□ -2.2
HLA-DMAP28067 SCARNA4-202ENST00000625402 129 ntBASIC1.31□□□□□ -2.2
HLA-DMAP28067 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
HLA-DMAP28067 AC006026.1-201ENST00000444025 1803 ntBASIC1.31□□□□□ -2.2
HLA-DMAP28067 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.3□□□□□ -2.2
HLA-DMAP28067 Y_RNA.67-201ENST00000362870 100 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 RNU6-1164P-201ENST00000364428 107 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.3□□□□□ -2.2
HLA-DMAP28067 MIR583-201ENST00000384846 75 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 MIR597-201ENST00000384968 97 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DMAP28067 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DMAP28067 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DMAP28067 AC079448.1-201ENST00000449377 373 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 FDX1P2-201ENST00000450769 375 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DMAP28067 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.3□□□□□ -2.2
HLA-DMAP28067 RPS29P15-201ENST00000458329 171 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 snoU13.14-201ENST00000459372 104 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 SNORD42A-201ENST00000459584 64 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 MTND3P7-201ENST00000474435 343 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 RPL30P1-201ENST00000488676 339 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 AC104564.1-201ENST00000493028 407 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.3□□□□□ -2.2
HLA-DMAP28067 AC074344.1-201ENST00000512823 224 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 Y_RNA.675-201ENST00000516389 149 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 SNORA18.6-201ENST00000516792 115 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
HLA-DMAP28067 AC022616.8-201ENST00000533569 253 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.3□□□□□ -2.2
HLA-DMAP28067 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.3□□□□□ -2.2
HLA-DMAP28067 AC123912.5-201ENST00000605470 343 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 AP001506.1-201ENST00000615444 211 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 AC136475.10-201ENST00000620253 385 ntBASIC1.3□□□□□ -2.2
HLA-DMAP28067 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.3□□□□□ -2.2
HLA-DMAP28067 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
HLA-DMAP28067 MTND5P17-201ENST00000418405 1603 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
HLA-DMAP28067 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
HLA-DMAP28067 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.29□□□□□ -2.2
HLA-DMAP28067 RNU6-1287P-201ENST00000362914 107 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 Y_RNA.324-201ENST00000365165 102 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 RNU6-1029P-201ENST00000384109 107 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 RNU6-1060P-201ENST00000384664 107 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 RNY3P10-201ENST00000384764 102 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 SNORA48.1-201ENST00000390879 135 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 Y_RNA.597-201ENST00000410463 100 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 GPR143P-201ENST00000434155 205 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 AC243964.1-201ENST00000441814 261 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.29□□□□□ -2.2
HLA-DMAP28067 SNORA59A-201ENST00000459326 152 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.29□□□□□ -2.2
HLA-DMAP28067 MTND1P22-201ENST00000510572 951 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 MTCO3P28-201ENST00000513351 515 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 MIR449C-201ENST00000516047 92 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 RNU5F-2P-201ENST00000516066 82 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 SNORD27.1-201ENST00000516319 72 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.29□□□□□ -2.2
HLA-DMAP28067 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.29□□□□□ -2.2
HLA-DMAP28067 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.29□□□□□ -2.2
HLA-DMAP28067 MIR502-201ENST00000606349 86 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.29□□□□□ -2.2
HLA-DMAP28067 MIR8074-201ENST00000615081 81 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 AC138649.3-201ENST00000622154 254 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 Z69720.2-201ENST00000624755 279 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.29□□□□□ -2.2
HLA-DMAP28067 U4.7-201ENST00000638126 106 ntBASIC1.29□□□□□ -2.2
HLA-DMAP28067 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
HLA-DMAP28067 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
HLA-DMAP28067 RNU6-428P-201ENST00000362942 107 ntBASIC1.28□□□□□ -2.2
HLA-DMAP28067 RNU6-181P-201ENST00000363225 107 ntBASIC1.28□□□□□ -2.2
HLA-DMAP28067 RNU6-527P-201ENST00000363425 104 ntBASIC1.28□□□□□ -2.2
HLA-DMAP28067 RNU5E-7P-201ENST00000365290 117 ntBASIC1.28□□□□□ -2.2
HLA-DMAP28067 MIR454-201ENST00000390180 115 ntBASIC1.28□□□□□ -2.2
HLA-DMAP28067 SNORA12-201ENST00000391162 147 ntBASIC1.28□□□□□ -2.2
HLA-DMAP28067 RNU1-78P-201ENST00000391248 165 ntBASIC1.28□□□□□ -2.2
HLA-DMAP28067 RAP1BP3-201ENST00000407180 549 ntBASIC1.28□□□□□ -2.2
HLA-DMAP28067 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.28□□□□□ -2.2
HLA-DMAP28067 USP9YP18-201ENST00000425912 695 ntBASIC1.28□□□□□ -2.2
HLA-DMAP28067 AL365400.1-201ENST00000431854 640 ntBASIC1.28□□□□□ -2.2
HLA-DMAP28067 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.28□□□□□ -2.2
HLA-DMAP28067 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.28□□□□□ -2.2
HLA-DMAP28067 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.28□□□□□ -2.2
HLA-DMAP28067 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.28□□□□□ -2.2
HLA-DMAP28067 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.28□□□□□ -2.2
HLA-DMAP28067 RNU6-445P-201ENST00000516949 107 ntBASIC1.28□□□□□ -2.2
HLA-DMAP28067 RNU6-250P-201ENST00000516958 103 ntBASIC1.28□□□□□ -2.2
HLA-DMAP28067 RNU6-410P-201ENST00000517006 107 ntBASIC1.28□□□□□ -2.2
HLA-DMAP28067 RN7SKP256-201ENST00000517201 314 ntBASIC1.28□□□□□ -2.2
HLA-DMAP28067 AC018630.3-201ENST00000542637 96 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 154.9 ms