Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 BTF3L4P2-201ENST00000392798 346 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DOBP13765 MTND3P9-201ENST00000429526 346 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DOBP13765 MTCYBP6-201ENST00000441810 138 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 AC243964.1-201ENST00000441814 261 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 AC007969.2-201ENST00000441891 191 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 AC091179.1-201ENST00000461606 579 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.51□□□□□ -2.01
HLA-DOBP13765 AC003982.1-202ENST00000469928 248 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DOBP13765 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DOBP13765 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.51□□□□□ -2.01
HLA-DOBP13765 SCARNA16.2-201ENST00000516520 172 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 SCARNA13-201ENST00000516672 275 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 CKS1BP7-201ENST00000522230 235 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.51□□□□□ -2.01
HLA-DOBP13765 AC010653.1-201ENST00000571108 881 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 MTCO3P13-201ENST00000577757 781 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 AL391813.1-201ENST00000603098 260 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 RNU6-91P-201ENST00000607774 107 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 AC092608.2-201ENST00000624427 218 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DOBP13765 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.51□□□□□ -2.01
HLA-DOBP13765 AC091564.4-201ENST00000533934 2194 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DOBP13765 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DOBP13765 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HLA-DOBP13765 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
HLA-DOBP13765 AC009487.2-201ENST00000420969 6821 ntBASIC2.51□□□□□ -2.01
HLA-DOBP13765 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.51□□□□□ -2.01
HLA-DOBP13765 MIR369-201ENST00000362155 70 ntBASIC2.5□□□□□ -2.01
HLA-DOBP13765 Y_RNA.138-201ENST00000363462 102 ntBASIC2.5□□□□□ -2.01
HLA-DOBP13765 SNORA9-201ENST00000384215 133 ntBASIC2.5□□□□□ -2.01
HLA-DOBP13765 RNA5SP354-201ENST00000391247 136 ntBASIC2.5□□□□□ -2.01
HLA-DOBP13765 RNA5SP390-201ENST00000410191 113 ntBASIC2.5□□□□□ -2.01
HLA-DOBP13765 RPL21P40-201ENST00000428586 483 ntBASIC2.5□□□□□ -2.01
HLA-DOBP13765 AC011816.1-201ENST00000441346 546 ntBASIC2.5□□□□□ -2.01
HLA-DOBP13765 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DOBP13765 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DOBP13765 AP001025.1-201ENST00000486139 332 ntBASIC2.5□□□□□ -2.01
HLA-DOBP13765 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.5□□□□□ -2.01
HLA-DOBP13765 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.5□□□□□ -2.01
HLA-DOBP13765 RNU6-976P-201ENST00000516086 111 ntBASIC2.5□□□□□ -2.01
HLA-DOBP13765 RNU5B-3P-201ENST00000516601 115 ntBASIC2.5□□□□□ -2.01
HLA-DOBP13765 RNA5SP384-201ENST00000516615 116 ntBASIC2.5□□□□□ -2.01
HLA-DOBP13765 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DOBP13765 DNAJC8P1-201ENST00000554535 372 ntBASIC2.5□□□□□ -2.01
HLA-DOBP13765 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DOBP13765 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.5□□□□□ -2.01
HLA-DOBP13765 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.5□□□□□ -2.01
HLA-DOBP13765 AC007742.2-201ENST00000618226 398 ntBASIC2.5□□□□□ -2.01
HLA-DOBP13765 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.5□□□□□ -2.01
HLA-DOBP13765 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
HLA-DOBP13765 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
HLA-DOBP13765 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
HLA-DOBP13765 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DOBP13765 RBBP8P1-201ENST00000449447 1844 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DOBP13765 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HLA-DOBP13765 SNORA63-201ENST00000363450 132 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 RNU6-622P-201ENST00000384272 103 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 RNU6-784P-201ENST00000384330 106 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 RNU6-692P-201ENST00000384496 107 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 RNU6-331P-201ENST00000384724 107 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 MIR147B-201ENST00000390185 80 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 SAR1AP2-201ENST00000392696 594 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 MIR548P-201ENST00000408336 84 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DOBP13765 BX276092.3-201ENST00000424182 230 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 RPL23AP50-201ENST00000434149 455 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 Y_RNA.631-201ENST00000459607 101 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DOBP13765 AC006483.1-201ENST00000487308 313 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 RPS27P26-201ENST00000494583 239 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DOBP13765 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DOBP13765 RNU6-470P-201ENST00000515954 104 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 SNORA74D-201ENST00000516404 141 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DOBP13765 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DOBP13765 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DOBP13765 ZNF861P-201ENST00000588126 639 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DOBP13765 BNIP3P22-201ENST00000593399 556 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 AL355877.2-201ENST00000603670 358 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 AC099654.10-201ENST00000640395 161 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DOBP13765 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DOBP13765 MTND5P9-201ENST00000503854 1755 ntBASIC2.49□□□□□ -2.01
HLA-DOBP13765 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.48□□□□□ -2.01
HLA-DOBP13765 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DOBP13765 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DOBP13765 RNU6-1115P-201ENST00000362490 106 ntBASIC2.48□□□□□ -2.01
HLA-DOBP13765 Y_RNA.445-201ENST00000384168 102 ntBASIC2.48□□□□□ -2.01
HLA-DOBP13765 AL590004.2-201ENST00000404787 371 ntBASIC2.48□□□□□ -2.01
HLA-DOBP13765 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DOBP13765 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.48□□□□□ -2.01
HLA-DOBP13765 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms