Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CXCL1P09341 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CXCL1P09341 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
CXCL1P09341 SNORA4.1-201ENST00000364263 144 ntBASIC0.49□□□□□ -2.33
CXCL1P09341 Y_RNA.578-201ENST00000390903 88 ntBASIC0.49□□□□□ -2.33
CXCL1P09341 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.49□□□□□ -2.33
CXCL1P09341 MTCO3P41-201ENST00000414801 328 ntBASIC0.49□□□□□ -2.33
CXCL1P09341 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.49□□□□□ -2.33
CXCL1P09341 MTND4P15-201ENST00000437913 1033 ntBASIC0.49□□□□□ -2.33
CXCL1P09341 AL008629.1-201ENST00000438615 184 ntBASIC0.49□□□□□ -2.33
CXCL1P09341 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CXCL1P09341 AC022447.4-201ENST00000504053 364 ntBASIC0.49□□□□□ -2.33
CXCL1P09341 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.49□□□□□ -2.33
CXCL1P09341 AC008837.2-201ENST00000513076 418 ntBASIC0.49□□□□□ -2.33
CXCL1P09341 AC112206.3-201ENST00000514578 389 ntBASIC0.49□□□□□ -2.33
CXCL1P09341 MIR449C-201ENST00000516047 92 ntBASIC0.49□□□□□ -2.33
CXCL1P09341 RNU6-165P-201ENST00000517170 99 ntBASIC0.49□□□□□ -2.33
CXCL1P09341 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CXCL1P09341 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.49□□□□□ -2.33
CXCL1P09341 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.49□□□□□ -2.33
CXCL1P09341 MIR3976-201ENST00000606807 139 ntBASIC0.49□□□□□ -2.33
CXCL1P09341 AC245297.2-201ENST00000610119 565 ntBASIC0.49□□□□□ -2.33
CXCL1P09341 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.49□□□□□ -2.33
CXCL1P09341 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
CXCL1P09341 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
CXCL1P09341 RNU4-15P-201ENST00000362613 141 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 RNU6-862P-201ENST00000362804 105 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 Y_RNA.140-201ENST00000363474 103 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 RNU6-560P-201ENST00000364007 108 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 RNU6-960P-201ENST00000364056 120 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 Y_RNA.327-201ENST00000365201 102 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 RNU5E-6P-201ENST00000365574 115 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 MIR200A-201ENST00000384875 90 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 MIR92A1-201ENST00000385233 78 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 MIR23A-201ENST00000385245 73 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 AL356776.1-201ENST00000406574 447 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 MTND3P20-201ENST00000407663 186 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.48□□□□□ -2.33
CXCL1P09341 AC092809.3-201ENST00000415453 231 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.48□□□□□ -2.33
CXCL1P09341 SNRPEP8-201ENST00000442866 260 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.48□□□□□ -2.33
CXCL1P09341 AL163540.1-201ENST00000485382 386 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 PDCD5P2-201ENST00000507570 312 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 RNU6-322P-201ENST00000516010 103 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 RNU6-113P-201ENST00000516653 101 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 AP003355.1-201ENST00000518956 587 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.48□□□□□ -2.33
CXCL1P09341 AL442163.3-201ENST00000554110 156 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 KC877982.1-201ENST00000602313 470 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 AL451064.1-201ENST00000607718 471 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 U6.42-201ENST00000618440 107 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
CXCL1P09341 AL589826.1-201ENST00000340697 249 ntBASIC0.47□□□□□ -2.33
CXCL1P09341 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CXCL1P09341 RNU6-1123P-201ENST00000362347 106 ntBASIC0.47□□□□□ -2.33
CXCL1P09341 RNU6-511P-201ENST00000363496 107 ntBASIC0.47□□□□□ -2.33
CXCL1P09341 RNU6-392P-201ENST00000364926 101 ntBASIC0.47□□□□□ -2.33
CXCL1P09341 RNU6-331P-201ENST00000384724 107 ntBASIC0.47□□□□□ -2.33
CXCL1P09341 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.47□□□□□ -2.33
CXCL1P09341 VPS26BP1-201ENST00000417155 755 ntBASIC0.47□□□□□ -2.33
CXCL1P09341 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.47□□□□□ -2.33
CXCL1P09341 AL591043.1-201ENST00000432461 424 ntBASIC0.47□□□□□ -2.33
CXCL1P09341 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.47□□□□□ -2.33
CXCL1P09341 AC092473.1-201ENST00000441098 221 ntBASIC0.47□□□□□ -2.33
CXCL1P09341 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
CXCL1P09341 RPS26P45-201ENST00000471748 340 ntBASIC0.47□□□□□ -2.33
CXCL1P09341 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.47□□□□□ -2.33
CXCL1P09341 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.47□□□□□ -2.33
CXCL1P09341 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.47□□□□□ -2.33
CXCL1P09341 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.47□□□□□ -2.33
CXCL1P09341 AL596327.1-201ENST00000603629 213 ntBASIC0.47□□□□□ -2.33
CXCL1P09341 AP000942.3-201ENST00000603702 160 ntBASIC0.47□□□□□ -2.33
CXCL1P09341 RMST_7.1-201ENST00000621935 268 ntBASIC0.47□□□□□ -2.33
CXCL1P09341 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.47□□□□□ -2.33
CXCL1P09341 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.47□□□□□ -2.33
CXCL1P09341 AL159152.1-201ENST00000635019 2587 ntBASIC0.47□□□□□ -2.33
CXCL1P09341 AC092104.1-201ENST00000497346 1441 ntBASIC0.47□□□□□ -2.33
CXCL1P09341 RNU6-1285P-201ENST00000363480 105 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 RNA5SP99-201ENST00000364020 114 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 RNU6-946P-201ENST00000383878 107 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 SNORA32.2-201ENST00000384049 122 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 RNU6-224P-201ENST00000384055 107 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 RPS3AP36-201ENST00000398190 775 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 RNU2-62P-201ENST00000410868 191 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 RNU4-22P-201ENST00000411058 166 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 ELOCP17-201ENST00000414751 326 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 ELOCP9-201ENST00000418624 239 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 AC063976.4-201ENST00000421971 163 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.46□□□□□ -2.34
CXCL1P09341 RAB28P5-201ENST00000427490 651 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 MTCYBP39-201ENST00000437562 491 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.46□□□□□ -2.34
CXCL1P09341 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.46□□□□□ -2.34
CXCL1P09341 RPL39P38-201ENST00000467018 153 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.46□□□□□ -2.34
CXCL1P09341 MTCO3P9-201ENST00000506989 781 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 SNORA31.4-201ENST00000516049 129 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 RNA5SP168-201ENST00000516642 112 ntBASIC0.46□□□□□ -2.34
CXCL1P09341 RN7SKP49-201ENST00000516675 260 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms