Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.51□□□□□ -2.17
SNX4O95219 Y_RNA.22-201ENST00000362492 102 ntBASIC1.51□□□□□ -2.17
SNX4O95219 RNU1-17P-201ENST00000363022 152 ntBASIC1.51□□□□□ -2.17
SNX4O95219 RNU2-3P-201ENST00000410144 191 ntBASIC1.51□□□□□ -2.17
SNX4O95219 RPL30P13-201ENST00000418873 348 ntBASIC1.51□□□□□ -2.17
SNX4O95219 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.51□□□□□ -2.17
SNX4O95219 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.51□□□□□ -2.17
SNX4O95219 RPL36AP21-201ENST00000490372 323 ntBASIC1.51□□□□□ -2.17
SNX4O95219 AC099513.1-201ENST00000490423 301 ntBASIC1.51□□□□□ -2.17
SNX4O95219 AC116562.3-201ENST00000506136 177 ntBASIC1.51□□□□□ -2.17
SNX4O95219 AC104136.1-201ENST00000512969 394 ntBASIC1.51□□□□□ -2.17
SNX4O95219 RNU6-377P-201ENST00000515965 102 ntBASIC1.51□□□□□ -2.17
SNX4O95219 MIR449C-201ENST00000516047 92 ntBASIC1.51□□□□□ -2.17
SNX4O95219 SNORD60.2-201ENST00000516883 86 ntBASIC1.51□□□□□ -2.17
SNX4O95219 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.51□□□□□ -2.17
SNX4O95219 AC068587.5-201ENST00000528506 175 ntBASIC1.51□□□□□ -2.17
SNX4O95219 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.51□□□□□ -2.17
SNX4O95219 SUB1P3-201ENST00000564581 315 ntBASIC1.51□□□□□ -2.17
SNX4O95219 MIR5094-201ENST00000578766 85 ntBASIC1.51□□□□□ -2.17
SNX4O95219 AC073539.2-201ENST00000597113 165 ntBASIC1.51□□□□□ -2.17
SNX4O95219 AL451064.1-201ENST00000607718 471 ntBASIC1.51□□□□□ -2.17
SNX4O95219 AC022306.3-201ENST00000619930 550 ntBASIC1.51□□□□□ -2.17
SNX4O95219 AC097372.5-201ENST00000623665 376 ntBASIC1.51□□□□□ -2.17
SNX4O95219 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.51□□□□□ -2.17
SNX4O95219 SNORD98-201ENST00000636377 67 ntBASIC1.51□□□□□ -2.17
SNX4O95219 AC006026.1-201ENST00000444025 1803 ntBASIC1.5□□□□□ -2.17
SNX4O95219 SNORD33-201ENST00000362761 85 ntBASIC1.5□□□□□ -2.17
SNX4O95219 RNU6-271P-201ENST00000363858 105 ntBASIC1.5□□□□□ -2.17
SNX4O95219 SNORD26-201ENST00000384147 75 ntBASIC1.5□□□□□ -2.17
SNX4O95219 RNU6-925P-201ENST00000384629 104 ntBASIC1.5□□□□□ -2.17
SNX4O95219 AC068050.1-201ENST00000394891 380 ntBASIC1.5□□□□□ -2.17
SNX4O95219 MTCO3P41-201ENST00000414801 328 ntBASIC1.5□□□□□ -2.17
SNX4O95219 RPL21P111-201ENST00000418453 477 ntBASIC1.5□□□□□ -2.17
SNX4O95219 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.5□□□□□ -2.17
SNX4O95219 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.5□□□□□ -2.17
SNX4O95219 JTBP1-201ENST00000441314 247 ntBASIC1.5□□□□□ -2.17
SNX4O95219 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.5□□□□□ -2.17
SNX4O95219 AC097473.1-201ENST00000508142 408 ntBASIC1.5□□□□□ -2.17
SNX4O95219 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.5□□□□□ -2.17
SNX4O95219 RN7SKP219-201ENST00000516825 296 ntBASIC1.5□□□□□ -2.17
SNX4O95219 SUMO2P18-201ENST00000518873 252 ntBASIC1.5□□□□□ -2.17
SNX4O95219 AL590229.1-201ENST00000603497 542 ntBASIC1.5□□□□□ -2.17
SNX4O95219 AC068944.2-201ENST00000610373 403 ntBASIC1.5□□□□□ -2.17
SNX4O95219 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
SNX4O95219 AL121890.5-201ENST00000620848 304 ntBASIC1.5□□□□□ -2.17
SNX4O95219 RNU6-1141P-201ENST00000364520 107 ntBASIC1.49□□□□□ -2.17
SNX4O95219 RNU6-360P-201ENST00000390944 104 ntBASIC1.49□□□□□ -2.17
SNX4O95219 AC000111.3-201ENST00000433478 193 ntBASIC1.49□□□□□ -2.17
SNX4O95219 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.49□□□□□ -2.17
SNX4O95219 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.49□□□□□ -2.17
SNX4O95219 ART2BP-201ENST00000453501 499 ntBASIC1.49□□□□□ -2.17
SNX4O95219 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.49□□□□□ -2.17
SNX4O95219 RPS26P55-201ENST00000471178 356 ntBASIC1.49□□□□□ -2.17
SNX4O95219 RPL26P26-201ENST00000480251 434 ntBASIC1.49□□□□□ -2.17
SNX4O95219 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.49□□□□□ -2.17
SNX4O95219 AC109479.2-201ENST00000517842 174 ntBASIC1.49□□□□□ -2.17
SNX4O95219 AC022616.3-201ENST00000523940 148 ntBASIC1.49□□□□□ -2.17
SNX4O95219 AC022878.1-201ENST00000530684 149 ntBASIC1.49□□□□□ -2.17
SNX4O95219 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.49□□□□□ -2.17
SNX4O95219 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.49□□□□□ -2.17
SNX4O95219 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.49□□□□□ -2.17
SNX4O95219 SNORA77B-201ENST00000578179 125 ntBASIC1.49□□□□□ -2.17
SNX4O95219 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.49□□□□□ -2.17
SNX4O95219 AC008752.3-201ENST00000588113 712 ntBASIC1.49□□□□□ -2.17
SNX4O95219 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SNX4O95219 AC091304.6-201ENST00000619761 202 ntBASIC1.49□□□□□ -2.17
SNX4O95219 AC022513.1-201ENST00000624512 117 ntBASIC1.49□□□□□ -2.17
SNX4O95219 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.49□□□□□ -2.17
SNX4O95219 MTND4P23-201ENST00000447723 1363 ntBASIC1.48□□□□□ -2.17
SNX4O95219 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.48□□□□□ -2.17
SNX4O95219 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SNX4O95219 RNU6-500P-201ENST00000362349 107 ntBASIC1.48□□□□□ -2.17
SNX4O95219 RNU5F-7P-201ENST00000363696 115 ntBASIC1.48□□□□□ -2.17
SNX4O95219 RNA5SP99-201ENST00000364020 114 ntBASIC1.48□□□□□ -2.17
SNX4O95219 Y_RNA.255-201ENST00000364581 97 ntBASIC1.48□□□□□ -2.17
SNX4O95219 RNU6-438P-201ENST00000365561 103 ntBASIC1.48□□□□□ -2.17
SNX4O95219 SNORA20.2-201ENST00000383922 131 ntBASIC1.48□□□□□ -2.17
SNX4O95219 RNU6-45P-201ENST00000384471 107 ntBASIC1.48□□□□□ -2.17
SNX4O95219 RNU6-296P-201ENST00000384608 107 ntBASIC1.48□□□□□ -2.17
SNX4O95219 SNORA12-201ENST00000391162 147 ntBASIC1.48□□□□□ -2.17
SNX4O95219 CYCSP33-201ENST00000414485 327 ntBASIC1.48□□□□□ -2.17
SNX4O95219 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.48□□□□□ -2.17
SNX4O95219 SDAD1P3-201ENST00000427380 333 ntBASIC1.48□□□□□ -2.17
SNX4O95219 AL669831.1-202ENST00000428504 417 ntBASIC1.48□□□□□ -2.17
SNX4O95219 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.48□□□□□ -2.17
SNX4O95219 AC243964.1-201ENST00000441814 261 ntBASIC1.48□□□□□ -2.17
SNX4O95219 USP9YP12-201ENST00000450481 570 ntBASIC1.48□□□□□ -2.17
SNX4O95219 RPS27AP8-201ENST00000452665 445 ntBASIC1.48□□□□□ -2.17
SNX4O95219 RPL31P3-201ENST00000458430 332 ntBASIC1.48□□□□□ -2.17
SNX4O95219 SNORD13-201ENST00000459299 104 ntBASIC1.48□□□□□ -2.17
SNX4O95219 RPL9P9-202ENST00000466501 579 ntBASIC1.48□□□□□ -2.17
SNX4O95219 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.48□□□□□ -2.17
SNX4O95219 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.48□□□□□ -2.17
SNX4O95219 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.48□□□□□ -2.17
SNX4O95219 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.48□□□□□ -2.17
SNX4O95219 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.48□□□□□ -2.17
SNX4O95219 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SNX4O95219 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.48□□□□□ -2.17
SNX4O95219 SNORD53B-201ENST00000577887 78 ntBASIC1.48□□□□□ -2.17
SNX4O95219 HMGN1P30-201ENST00000589286 268 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms