Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.66□□□□□ -1.66
PTCD1O75127 U4.6-201ENST00000621618 127 ntBASIC4.66□□□□□ -1.66
PTCD1O75127 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTCD1O75127 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
PTCD1O75127 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PTCD1O75127 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.66□□□□□ -1.66
PTCD1O75127 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.65□□□□□ -1.66
PTCD1O75127 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
PTCD1O75127 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.66
PTCD1O75127 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.65□□□□□ -1.66
PTCD1O75127 RNU6-1130P-201ENST00000365434 107 ntBASIC4.65□□□□□ -1.67
PTCD1O75127 RNU6-44P-201ENST00000384045 107 ntBASIC4.65□□□□□ -1.67
PTCD1O75127 Y_RNA.504-201ENST00000384481 104 ntBASIC4.65□□□□□ -1.67
PTCD1O75127 RNU6-131P-201ENST00000391144 107 ntBASIC4.65□□□□□ -1.67
PTCD1O75127 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.65□□□□□ -1.67
PTCD1O75127 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.65□□□□□ -1.67
PTCD1O75127 RPS29P2-201ENST00000479278 136 ntBASIC4.65□□□□□ -1.67
PTCD1O75127 RNU6-928P-201ENST00000516876 104 ntBASIC4.65□□□□□ -1.67
PTCD1O75127 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.65□□□□□ -1.67
PTCD1O75127 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.65□□□□□ -1.67
PTCD1O75127 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.65□□□□□ -1.67
PTCD1O75127 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
PTCD1O75127 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
PTCD1O75127 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.65□□□□□ -1.67
PTCD1O75127 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
PTCD1O75127 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTCD1O75127 RNU6-1280P-201ENST00000365211 107 ntBASIC4.64□□□□□ -1.67
PTCD1O75127 MIR544A-201ENST00000384855 91 ntBASIC4.64□□□□□ -1.67
PTCD1O75127 MIR128-1-201ENST00000384921 82 ntBASIC4.64□□□□□ -1.67
PTCD1O75127 SNORA53-201ENST00000391141 249 ntBASIC4.64□□□□□ -1.67
PTCD1O75127 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.64□□□□□ -1.67
PTCD1O75127 FTH1P15-201ENST00000406984 280 ntBASIC4.64□□□□□ -1.67
PTCD1O75127 BMS1P22-201ENST00000414726 313 ntBASIC4.64□□□□□ -1.67
PTCD1O75127 AC074117.2-201ENST00000417130 397 ntBASIC4.64□□□□□ -1.67
PTCD1O75127 AL645939.1-201ENST00000453429 797 ntBASIC4.64□□□□□ -1.67
PTCD1O75127 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.64□□□□□ -1.67
PTCD1O75127 RNU6-1219P-201ENST00000516143 112 ntBASIC4.64□□□□□ -1.67
PTCD1O75127 RNU2-27P-201ENST00000516185 142 ntBASIC4.64□□□□□ -1.67
PTCD1O75127 RNY3P16-201ENST00000516338 101 ntBASIC4.64□□□□□ -1.67
PTCD1O75127 RNU2-58P-201ENST00000516403 183 ntBASIC4.64□□□□□ -1.67
PTCD1O75127 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.64□□□□□ -1.67
PTCD1O75127 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.64□□□□□ -1.67
PTCD1O75127 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.64□□□□□ -1.67
PTCD1O75127 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.64□□□□□ -1.67
PTCD1O75127 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
PTCD1O75127 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PTCD1O75127 AL109809.4-201ENST00000603520 2185 ntBASIC4.64□□□□□ -1.67
PTCD1O75127 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
PTCD1O75127 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.64□□□□□ -1.67
PTCD1O75127 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.63□□□□□ -1.67
PTCD1O75127 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTCD1O75127 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
PTCD1O75127 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTCD1O75127 Y_RNA.44-201ENST00000362676 108 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 SNORD32A-201ENST00000364805 84 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 RNU6-215P-201ENST00000365169 102 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 RNU6-290P-201ENST00000365212 101 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 RNU6-318P-201ENST00000384283 103 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 SNORA11.2-201ENST00000408318 127 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 AC012308.1-201ENST00000451232 178 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 SSXP4-201ENST00000451349 245 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 COX6CP14-201ENST00000469580 174 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 RPS29P20-201ENST00000489592 171 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 RNU6-1114P-201ENST00000516022 107 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 RNU6-62P-201ENST00000516526 102 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.63□□□□□ -1.67
PTCD1O75127 AC233702.9-201ENST00000581528 203 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 AL451007.1-201ENST00000595491 289 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 MIR7851-201ENST00000610611 160 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.63□□□□□ -1.67
PTCD1O75127 ZNF826P-207ENST00000622273 1910 ntBASIC4.63□□□□□ -1.67
PTCD1O75127 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTCD1O75127 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTCD1O75127 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PTCD1O75127 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PTCD1O75127 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PTCD1O75127 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
PTCD1O75127 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PTCD1O75127 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PTCD1O75127 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 RNA5SP361-201ENST00000362686 118 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 RNU6-923P-201ENST00000364753 107 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 Y_RNA.286-201ENST00000364813 102 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 SNORD17-201ENST00000390930 237 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 RPS4XP3-201ENST00000398541 413 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 SNORD12B-201ENST00000410433 91 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 RNU5E-9P-201ENST00000411164 104 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 RPL19P1-201ENST00000411635 428 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 NDUFS5P4-201ENST00000412983 318 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.62□□□□□ -1.67
PTCD1O75127 NDUFB1P1-201ENST00000435191 180 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 GPM6BP3-201ENST00000442797 145 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.62□□□□□ -1.67
PTCD1O75127 RPL26P9-201ENST00000457466 433 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 AC084357.1-201ENST00000473404 255 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 AC140059.1-201ENST00000489238 361 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 RPS27AP10-201ENST00000496103 208 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 RNU6-581P-201ENST00000516214 105 ntBASIC4.62□□□□□ -1.67
PTCD1O75127 CR383656.8-201ENST00000549046 145 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms