Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
TRIM13O60858 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM13O60858 AC116096.1-201ENST00000566804 2314 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 Y_RNA.71-201ENST00000362892 104 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 RNU6-626P-201ENST00000363354 107 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 RNA5SP197-201ENST00000363357 119 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 RNU6-151P-201ENST00000364158 107 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 Y_RNA.230-201ENST00000364348 109 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 RNA5SP189-201ENST00000364920 115 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 RNU6-1175P-201ENST00000365200 107 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 Y_RNA.357-201ENST00000365487 109 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 Y_RNA.412-201ENST00000384001 104 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 U1.1-201ENST00000384101 164 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 RNU6-20P-201ENST00000384106 107 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 RPL21P65-201ENST00000406094 466 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 Z85995.1-201ENST00000415547 335 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 AC017083.1-201ENST00000428093 483 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.64□□□□□ -1.83
TRIM13O60858 IFNA11P-201ENST00000446352 526 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM13O60858 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM13O60858 AL137159.1-201ENST00000452808 512 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 NUTF2P7-201ENST00000453086 375 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 AP000870.1-201ENST00000472927 406 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 RPS4XP22-201ENST00000480755 780 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 RPL23AP75-201ENST00000491601 451 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 AC097462.2-201ENST00000504623 481 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM13O60858 RNU6-377P-201ENST00000515965 102 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 SNORA31.9-201ENST00000516429 84 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 RN7SKP49-201ENST00000516675 260 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 RNU6-971P-201ENST00000516920 106 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 SUMO2P18-201ENST00000518873 252 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.64□□□□□ -1.83
TRIM13O60858 TGIF1P1-201ENST00000558095 802 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 AC055872.1-201ENST00000570978 278 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM13O60858 AC024614.2-201ENST00000577584 372 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 MIR548X2-201ENST00000579776 100 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 MIR4425-201ENST00000580572 84 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM13O60858 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.64□□□□□ -1.83
TRIM13O60858 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 AC112484.5-201ENST00000624189 228 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 MIR492-201ENST00000638676 116 ntBASIC3.64□□□□□ -1.83
TRIM13O60858 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM13O60858 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM13O60858 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
TRIM13O60858 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM13O60858 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM13O60858 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM13O60858 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM13O60858 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM13O60858 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM13O60858 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM13O60858 Y_RNA.7-201ENST00000362352 102 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 Y_RNA.75-201ENST00000362927 97 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 SNORD6-201ENST00000365444 73 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 RNA5SP167-201ENST00000365461 116 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.63□□□□□ -1.83
TRIM13O60858 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TRIM13O60858 RPS26P8-201ENST00000393490 348 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 AL357075.1-201ENST00000404107 726 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 MTHFD2P2-201ENST00000407725 247 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 RNU2-52P-201ENST00000410680 190 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 RPL18P10-201ENST00000425606 538 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM13O60858 AC096638.1-201ENST00000444678 216 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 RPL23AP3-201ENST00000453844 468 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 RPS27AP9-201ENST00000477681 438 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 AC010265.1-201ENST00000513509 211 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 SNORA70.16-201ENST00000516390 95 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 RNA5SP291-201ENST00000517222 105 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM13O60858 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM13O60858 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM13O60858 MIR4782-201ENST00000577987 79 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM13O60858 MIR3939-201ENST00000582614 106 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 MIR6500-201ENST00000622700 86 ntBASIC3.63□□□□□ -1.83
TRIM13O60858 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM13O60858 AC008568.2-201ENST00000623862 2313 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 AL079305.1-201ENST00000623159 3008 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
TRIM13O60858 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM13O60858 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM13O60858 RNA5SP42-201ENST00000364278 115 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 Y_RNA.238-201ENST00000364441 102 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 RNU6-741P-201ENST00000383889 107 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 RNU6-211P-201ENST00000384047 107 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 RNU6-968P-201ENST00000384076 107 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 BTF3L4P2-201ENST00000392798 346 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 UBA52P6-201ENST00000399822 382 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM13O60858 RAB28P5-201ENST00000427490 651 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 MTND4LP9-201ENST00000427694 174 ntBASIC3.62□□□□□ -1.83
TRIM13O60858 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM13O60858 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM13O60858 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms