Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 RPL23AP58-201ENST00000440453 469 ntBASIC3.29□□□□□ -1.88
CTNND1O60716 RPL36AP48-201ENST00000485521 314 ntBASIC3.29□□□□□ -1.88
CTNND1O60716 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.29□□□□□ -1.88
CTNND1O60716 PTP4A1P4-201ENST00000512479 322 ntBASIC3.29□□□□□ -1.88
CTNND1O60716 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.29□□□□□ -1.88
CTNND1O60716 AC105137.2-201ENST00000569073 466 ntBASIC3.29□□□□□ -1.88
CTNND1O60716 MIR4435-1-201ENST00000582552 80 ntBASIC3.29□□□□□ -1.88
CTNND1O60716 MIR4506-201ENST00000584693 77 ntBASIC3.29□□□□□ -1.88
CTNND1O60716 MIR8076-201ENST00000611401 83 ntBASIC3.29□□□□□ -1.88
CTNND1O60716 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.29□□□□□ -1.88
CTNND1O60716 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CTNND1O60716 MTND5P30-201ENST00000452896 1731 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTNND1O60716 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTNND1O60716 RNU6-227P-201ENST00000362865 103 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 RNU6-797P-201ENST00000363101 109 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 SNORA68.1-201ENST00000364537 132 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 RNU6-601P-201ENST00000384540 107 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 RNU6-306P-201ENST00000384617 107 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 RNU4-14P-201ENST00000410858 122 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 BMS1P22-201ENST00000414726 313 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 AC138623.1-201ENST00000418060 216 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 ARL5AP4-201ENST00000430731 512 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 Z98742.2-201ENST00000431564 187 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.28□□□□□ -1.88
CTNND1O60716 DAP3P1-201ENST00000441522 278 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 AC009296.1-201ENST00000443146 155 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.28□□□□□ -1.88
CTNND1O60716 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.28□□□□□ -1.88
CTNND1O60716 RPL22P13-201ENST00000493291 347 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 RNA5SP385-201ENST00000515947 110 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 RNU6-1016P-201ENST00000516689 94 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 AC109329.1-201ENST00000518744 317 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.28□□□□□ -1.88
CTNND1O60716 AL355375.2-201ENST00000574825 175 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 MIR3124-201ENST00000582636 67 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 MIR4765-201ENST00000585007 77 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 AC010620.2-201ENST00000600135 313 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 MIR3976-201ENST00000606807 139 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 AC007792.1-201ENST00000623023 402 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 MIR7515-201ENST00000637837 67 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTNND1O60716 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CTNND1O60716 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.28□□□□□ -1.88
CTNND1O60716 AL359854.1-201ENST00000614203 1594 ntBASIC3.28□□□□□ -1.88
CTNND1O60716 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CTNND1O60716 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.27□□□□□ -1.89
CTNND1O60716 RNU6-1010P-201ENST00000362757 107 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 RNU6-1222P-201ENST00000384615 107 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 MIR521-1-201ENST00000384902 87 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 BTF3L4P2-201ENST00000392798 346 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 MTND3P9-201ENST00000429526 346 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 AL031659.1-201ENST00000447075 539 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 FTH1P25-201ENST00000447665 469 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 RPL39P29-201ENST00000447779 157 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.27□□□□□ -1.89
CTNND1O60716 SNORD5.1-201ENST00000458800 75 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 RPS29P27-201ENST00000463711 170 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 AC008571.1-201ENST00000467232 300 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 RPL30P12-201ENST00000474666 353 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 HPRT1P3-201ENST00000539521 576 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 AC079598.5-201ENST00000547460 117 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.27□□□□□ -1.89
CTNND1O60716 AC004832.5-201ENST00000608677 401 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 AL359697.1-201ENST00000624879 587 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 AC243829.7-201ENST00000633081 225 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CTNND1O60716 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CTNND1O60716 AC002543.1-201ENST00000299783 1954 ntBASIC3.27□□□□□ -1.89
CTNND1O60716 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CTNND1O60716 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTNND1O60716 U8.8-201ENST00000365399 135 ntBASIC3.26□□□□□ -1.89
CTNND1O60716 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.26□□□□□ -1.89
CTNND1O60716 AC097463.2-201ENST00000421074 142 ntBASIC3.26□□□□□ -1.89
CTNND1O60716 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.26□□□□□ -1.89
CTNND1O60716 SAR1AP4-201ENST00000429225 591 ntBASIC3.26□□□□□ -1.89
CTNND1O60716 USP9YP30-201ENST00000430729 455 ntBASIC3.26□□□□□ -1.89
CTNND1O60716 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.26□□□□□ -1.89
CTNND1O60716 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CTNND1O60716 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.26□□□□□ -1.89
CTNND1O60716 AC112771.1-201ENST00000463581 102 ntBASIC3.26□□□□□ -1.89
CTNND1O60716 AC026782.1-201ENST00000512952 449 ntBASIC3.26□□□□□ -1.89
CTNND1O60716 ACA59.1-201ENST00000515966 143 ntBASIC3.26□□□□□ -1.89
CTNND1O60716 RNU6-559P-201ENST00000516151 98 ntBASIC3.26□□□□□ -1.89
CTNND1O60716 RN7SKP282-201ENST00000516824 299 ntBASIC3.26□□□□□ -1.89
CTNND1O60716 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.26□□□□□ -1.89
CTNND1O60716 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.26□□□□□ -1.89
CTNND1O60716 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.26□□□□□ -1.89
CTNND1O60716 MIR4795-201ENST00000584182 89 ntBASIC3.26□□□□□ -1.89
CTNND1O60716 AC078795.3-201ENST00000602913 472 ntBASIC3.26□□□□□ -1.89
CTNND1O60716 AC018462.2-201ENST00000605375 395 ntBASIC3.26□□□□□ -1.89
CTNND1O60716 AL359757.2-201ENST00000624309 274 ntBASIC3.26□□□□□ -1.89
CTNND1O60716 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTNND1O60716 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTNND1O60716 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.25□□□□□ -1.89
CTNND1O60716 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CTNND1O60716 RNU6-596P-201ENST00000365395 98 ntBASIC3.25□□□□□ -1.89
CTNND1O60716 RNU6-1140P-201ENST00000410517 106 ntBASIC3.25□□□□□ -1.89
CTNND1O60716 RNU2-23P-201ENST00000410545 195 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms