Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 OR9R1P-201ENST00000412200 877 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 SNORD56-201ENST00000413522 71 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 AC008267.5-201ENST00000424928 265 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.02□□□□□ -2.09
LCMT2O60294 SRIP2-201ENST00000428470 166 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.02□□□□□ -2.09
LCMT2O60294 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LCMT2O60294 AC096638.1-201ENST00000444678 216 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 AL353705.4-201ENST00000449661 238 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 AC012308.1-201ENST00000451232 178 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 MTCO3P38-201ENST00000468910 766 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 AC107032.1-201ENST00000485945 480 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 AC091435.1-201ENST00000505442 584 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 Y_RNA.655-201ENST00000515919 96 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 SNORA4.4-201ENST00000515921 135 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LCMT2O60294 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.02□□□□□ -2.09
LCMT2O60294 AC016957.1-201ENST00000534895 309 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 AC090115.3-201ENST00000553218 849 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.02□□□□□ -2.09
LCMT2O60294 OR11H5P-201ENST00000554039 926 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.02□□□□□ -2.09
LCMT2O60294 APOOP1-201ENST00000604695 592 ntBASIC2.02□□□□□ -2.09
LCMT2O60294 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.02□□□□□ -2.09
LCMT2O60294 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.02□□□□□ -2.09
LCMT2O60294 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
LCMT2O60294 RNA5SP37-201ENST00000365420 130 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 RNU6-487P-201ENST00000365430 104 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 Y_RNA.378-201ENST00000365652 113 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 RNU6-1032P-201ENST00000384100 107 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 Y_RNA.480-201ENST00000384364 102 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 RNA5SP219-201ENST00000390940 113 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 SNORD37.1-201ENST00000390968 65 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 RNU6-1068P-201ENST00000410958 103 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.01□□□□□ -2.09
LCMT2O60294 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.01□□□□□ -2.09
LCMT2O60294 AL365400.1-201ENST00000431854 640 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 AC007969.2-201ENST00000441891 191 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.01□□□□□ -2.09
LCMT2O60294 RNU1-41P-201ENST00000516161 162 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 RNU1-48P-201ENST00000516400 162 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 RNU6-314P-201ENST00000516574 104 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 RNU2-19P-201ENST00000517288 84 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.01□□□□□ -2.09
LCMT2O60294 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.01□□□□□ -2.09
LCMT2O60294 HMGB1P33-201ENST00000563485 527 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.01□□□□□ -2.09
LCMT2O60294 EIF1P4-201ENST00000572664 335 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 AC090897.2-201ENST00000581715 130 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.01□□□□□ -2.09
LCMT2O60294 U2.17-201ENST00000611454 95 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
LCMT2O60294 AC008121.3-201ENST00000618726 433 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 HAUS6P2-201ENST00000433254 2404 ntBASIC2.01□□□□□ -2.09
LCMT2O60294 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2□□□□□ -2.09
LCMT2O60294 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2□□□□□ -2.09
LCMT2O60294 RNU6-1010P-201ENST00000362757 107 ntBASIC2□□□□□ -2.09
LCMT2O60294 RNU6-428P-201ENST00000362942 107 ntBASIC2□□□□□ -2.09
LCMT2O60294 Y_RNA.516-201ENST00000384541 124 ntBASIC2□□□□□ -2.09
LCMT2O60294 Y_RNA.554-201ENST00000384672 102 ntBASIC2□□□□□ -2.09
LCMT2O60294 MIR17-201ENST00000385012 84 ntBASIC2□□□□□ -2.09
LCMT2O60294 MIR95-201ENST00000385072 81 ntBASIC2□□□□□ -2.09
LCMT2O60294 MIR561-201ENST00000385216 97 ntBASIC2□□□□□ -2.09
LCMT2O60294 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LCMT2O60294 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2□□□□□ -2.09
LCMT2O60294 RN7SKP284-201ENST00000411002 343 ntBASIC2□□□□□ -2.09
LCMT2O60294 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2□□□□□ -2.09
LCMT2O60294 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2□□□□□ -2.09
LCMT2O60294 TIMM9P3-201ENST00000428659 274 ntBASIC2□□□□□ -2.09
LCMT2O60294 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LCMT2O60294 USP9YP8-201ENST00000441913 500 ntBASIC2□□□□□ -2.09
LCMT2O60294 RPL30P12-201ENST00000474666 353 ntBASIC2□□□□□ -2.09
LCMT2O60294 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2□□□□□ -2.09
LCMT2O60294 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2□□□□□ -2.09
LCMT2O60294 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2□□□□□ -2.09
LCMT2O60294 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2□□□□□ -2.09
LCMT2O60294 AC107953.1-201ENST00000522216 297 ntBASIC2□□□□□ -2.09
LCMT2O60294 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2□□□□□ -2.09
LCMT2O60294 MIR4529-201ENST00000578110 78 ntBASIC2□□□□□ -2.09
LCMT2O60294 MIR3945-201ENST00000581853 98 ntBASIC2□□□□□ -2.09
LCMT2O60294 RPL30P11-203ENST00000598995 310 ntBASIC2□□□□□ -2.09
LCMT2O60294 AP000553.5-201ENST00000641933 54 ntBASIC2□□□□□ -2.09
LCMT2O60294 MTND4P1-201ENST00000457501 1466 ntBASIC2□□□□□ -2.09
LCMT2O60294 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LCMT2O60294 U8.2-201ENST00000363156 134 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 RNU6-105P-201ENST00000363909 104 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 RNU6-1090P-201ENST00000364065 94 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 RNU4-66P-201ENST00000365199 138 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 SNORA25B-201ENST00000365507 128 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 MIR186-201ENST00000384988 86 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 AL591034.2-201ENST00000402839 359 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 AL590002.1-201ENST00000406554 418 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 U3.40-201ENST00000408706 208 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 RNU6-908P-201ENST00000410160 94 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.99□□□□□ -2.09
LCMT2O60294 GPM6BP3-201ENST00000442797 145 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 MTND3P16-201ENST00000452205 344 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 AC006026.2-201ENST00000457376 180 ntBASIC1.99□□□□□ -2.09
LCMT2O60294 RPS27P21-201ENST00000486977 252 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms