Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.87□□□□□ -2.11
MSH4O15457 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
MSH4O15457 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
MSH4O15457 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-37P-201ENST00000362692 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-11P-201ENST00000364234 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-25P-201ENST00000383873 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-1-201ENST00000383898 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-48P-201ENST00000384161 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-36P-201ENST00000384172 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-4P-201ENST00000384205 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-5P-201ENST00000384238 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-3P-201ENST00000384314 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-16P-201ENST00000384385 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-348P-201ENST00000384386 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-15P-201ENST00000384534 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-2-201ENST00000384627 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-29P-201ENST00000384637 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-9-201ENST00000384776 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-33P-201ENST00000384793 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.86□□□□□ -2.11
MSH4O15457 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.86□□□□□ -2.11
MSH4O15457 MTCO2P11-201ENST00000431069 680 ntBASIC1.86□□□□□ -2.11
MSH4O15457 MTND4P32-201ENST00000437189 1237 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RPL39P29-201ENST00000447779 157 ntBASIC1.86□□□□□ -2.11
MSH4O15457 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.86□□□□□ -2.11
MSH4O15457 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.86□□□□□ -2.11
MSH4O15457 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.86□□□□□ -2.11
MSH4O15457 ARL2BPP4-201ENST00000506854 471 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-667P-201ENST00000517186 102 ntBASIC1.86□□□□□ -2.11
MSH4O15457 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.86□□□□□ -2.11
MSH4O15457 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.86□□□□□ -2.11
MSH4O15457 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.86□□□□□ -2.11
MSH4O15457 AP000763.2-201ENST00000540641 163 ntBASIC1.86□□□□□ -2.11
MSH4O15457 AL391840.1-201ENST00000571144 367 ntBASIC1.86□□□□□ -2.11
MSH4O15457 AC024614.2-201ENST00000577584 372 ntBASIC1.86□□□□□ -2.11
MSH4O15457 MIR4529-201ENST00000578110 78 ntBASIC1.86□□□□□ -2.11
MSH4O15457 AC087752.4-201ENST00000605911 462 ntBASIC1.86□□□□□ -2.11
MSH4O15457 RNU6-6P-201ENST00000606623 107 ntBASIC1.86□□□□□ -2.11
MSH4O15457 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
MSH4O15457 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
MSH4O15457 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.86□□□□□ -2.11
MSH4O15457 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.86□□□□□ -2.11
MSH4O15457 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
MSH4O15457 U3.13-201ENST00000364804 214 ntBASIC1.85□□□□□ -2.11
MSH4O15457 RNU6-393P-201ENST00000384475 107 ntBASIC1.85□□□□□ -2.11
MSH4O15457 RNU6-606P-201ENST00000384721 111 ntBASIC1.85□□□□□ -2.11
MSH4O15457 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
MSH4O15457 SNORA17.3-201ENST00000391159 129 ntBASIC1.85□□□□□ -2.11
MSH4O15457 HMGN2P39-201ENST00000398005 273 ntBASIC1.85□□□□□ -2.11
MSH4O15457 RNU2-32P-201ENST00000411193 191 ntBASIC1.85□□□□□ -2.11
MSH4O15457 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.85□□□□□ -2.11
MSH4O15457 AC007969.2-201ENST00000441891 191 ntBASIC1.85□□□□□ -2.11
MSH4O15457 GPM6BP3-201ENST00000442797 145 ntBASIC1.85□□□□□ -2.11
MSH4O15457 AC132479.1-201ENST00000449160 144 ntBASIC1.85□□□□□ -2.11
MSH4O15457 RNU6-956P-201ENST00000458868 103 ntBASIC1.85□□□□□ -2.11
MSH4O15457 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.85□□□□□ -2.11
MSH4O15457 MTCO3P7-201ENST00000510008 774 ntBASIC1.85□□□□□ -2.11
MSH4O15457 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.85□□□□□ -2.11
MSH4O15457 RNA5SP458-201ENST00000516188 119 ntBASIC1.85□□□□□ -2.11
MSH4O15457 MTCO2P4-201ENST00000517968 247 ntBASIC1.85□□□□□ -2.11
MSH4O15457 AP003392.2-201ENST00000527269 208 ntBASIC1.85□□□□□ -2.11
MSH4O15457 NDUFA5P6-201ENST00000542110 379 ntBASIC1.85□□□□□ -2.11
MSH4O15457 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.85□□□□□ -2.11
MSH4O15457 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.85□□□□□ -2.11
MSH4O15457 MIR4528-201ENST00000577763 90 ntBASIC1.85□□□□□ -2.11
MSH4O15457 AC026271.5-201ENST00000577873 130 ntBASIC1.85□□□□□ -2.11
MSH4O15457 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.85□□□□□ -2.11
MSH4O15457 AC025449.1-201ENST00000603896 529 ntBASIC1.85□□□□□ -2.11
MSH4O15457 AL136363.2-201ENST00000604173 851 ntBASIC1.85□□□□□ -2.11
MSH4O15457 AC008536.2-201ENST00000607284 349 ntBASIC1.85□□□□□ -2.11
MSH4O15457 Z82243.1-201ENST00000609432 473 ntBASIC1.85□□□□□ -2.11
MSH4O15457 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
MSH4O15457 U4.7-201ENST00000638126 106 ntBASIC1.85□□□□□ -2.11
MSH4O15457 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.85□□□□□ -2.11
MSH4O15457 MTND4P23-201ENST00000447723 1363 ntBASIC1.85□□□□□ -2.11
MSH4O15457 snoU2_19.1-201ENST00000362361 80 ntBASIC1.84□□□□□ -2.11
MSH4O15457 Y_RNA.140-201ENST00000363474 103 ntBASIC1.84□□□□□ -2.11
MSH4O15457 RNY3P9-201ENST00000384727 106 ntBASIC1.84□□□□□ -2.11
MSH4O15457 MIR544A-201ENST00000384855 91 ntBASIC1.84□□□□□ -2.11
MSH4O15457 MIR17-201ENST00000385012 84 ntBASIC1.84□□□□□ -2.11
MSH4O15457 SNORD70.1-201ENST00000391007 85 ntBASIC1.84□□□□□ -2.11
MSH4O15457 SNORA46.1-201ENST00000391069 153 ntBASIC1.84□□□□□ -2.11
MSH4O15457 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.84□□□□□ -2.11
MSH4O15457 PRPS1P1-201ENST00000445305 876 ntBASIC1.84□□□□□ -2.11
MSH4O15457 AL353752.1-201ENST00000454946 260 ntBASIC1.84□□□□□ -2.11
MSH4O15457 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.84□□□□□ -2.11
MSH4O15457 HMGB1P35-201ENST00000503360 598 ntBASIC1.84□□□□□ -2.11
MSH4O15457 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.84□□□□□ -2.11
MSH4O15457 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.84□□□□□ -2.11
MSH4O15457 LRRC34P2-201ENST00000514850 553 ntBASIC1.84□□□□□ -2.11
MSH4O15457 MTND2P38-201ENST00000522536 667 ntBASIC1.84□□□□□ -2.11
MSH4O15457 AP001893.2-201ENST00000526949 202 ntBASIC1.84□□□□□ -2.11
MSH4O15457 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.84□□□□□ -2.11
MSH4O15457 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.84□□□□□ -2.11
MSH4O15457 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.84□□□□□ -2.11
MSH4O15457 AC091135.1-201ENST00000585943 307 ntBASIC1.84□□□□□ -2.11
MSH4O15457 AC078795.2-201ENST00000602835 1252 ntBASIC1.84□□□□□ -2.11
MSH4O15457 AL159153.1-201ENST00000619688 317 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms