Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC008121.3-201ENST00000618726 433 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 AC090517.3-201ENST00000625170 141 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
PDLIM1O00151 MTND5P6-201ENST00000422338 1798 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 RNU6-655P-201ENST00000362858 107 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 SNORA16B-201ENST00000364674 135 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 MIR544A-201ENST00000384855 91 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 SNORA3.2-201ENST00000408221 125 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 RNU2-23P-201ENST00000410545 195 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 SNORD56-201ENST00000413522 71 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.01□□□□□ -2.09
PDLIM1O00151 MTCO3P41-201ENST00000414801 328 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 AL031274.1-201ENST00000450334 232 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 FDX1P2-201ENST00000450769 375 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.01□□□□□ -2.09
PDLIM1O00151 AC117503.1-201ENST00000472241 394 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.01□□□□□ -2.09
PDLIM1O00151 MRPS17P9-201ENST00000511924 393 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 SNORA25.17-201ENST00000517184 124 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.01□□□□□ -2.09
PDLIM1O00151 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.01□□□□□ -2.09
PDLIM1O00151 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.01□□□□□ -2.09
PDLIM1O00151 MTCO3P23-201ENST00000561363 289 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.01□□□□□ -2.09
PDLIM1O00151 AL713866.2-201ENST00000603579 219 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 AC093783.1-201ENST00000612976 329 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 AC068792.1-201ENST00000621354 417 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 AC064859.1-201ENST00000624741 174 ntBASIC2.01□□□□□ -2.09
PDLIM1O00151 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
PDLIM1O00151 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
PDLIM1O00151 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PDLIM1O00151 AC002543.1-201ENST00000299783 1954 ntBASIC2□□□□□ -2.09
PDLIM1O00151 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2□□□□□ -2.09
PDLIM1O00151 U3.13-201ENST00000364804 214 ntBASIC2□□□□□ -2.09
PDLIM1O00151 SNORA69-201ENST00000383895 132 ntBASIC2□□□□□ -2.09
PDLIM1O00151 MIR221-201ENST00000385135 110 ntBASIC2□□□□□ -2.09
PDLIM1O00151 SNORA48.3-201ENST00000391081 134 ntBASIC2□□□□□ -2.09
PDLIM1O00151 RNA5SP508-201ENST00000411327 119 ntBASIC2□□□□□ -2.09
PDLIM1O00151 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2□□□□□ -2.09
PDLIM1O00151 AIMP1P2-201ENST00000425294 312 ntBASIC2□□□□□ -2.09
PDLIM1O00151 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2□□□□□ -2.09
PDLIM1O00151 AL356320.1-201ENST00000429616 163 ntBASIC2□□□□□ -2.09
PDLIM1O00151 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2□□□□□ -2.09
PDLIM1O00151 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2□□□□□ -2.09
PDLIM1O00151 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2□□□□□ -2.09
PDLIM1O00151 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2□□□□□ -2.09
PDLIM1O00151 RNU6-261P-201ENST00000459506 102 ntBASIC2□□□□□ -2.09
PDLIM1O00151 AC083798.1-201ENST00000472671 131 ntBASIC2□□□□□ -2.09
PDLIM1O00151 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2□□□□□ -2.09
PDLIM1O00151 RNU6-586P-201ENST00000517265 104 ntBASIC2□□□□□ -2.09
PDLIM1O00151 AC022880.1-201ENST00000534017 973 ntBASIC2□□□□□ -2.09
PDLIM1O00151 SNRPGP18-201ENST00000553000 214 ntBASIC2□□□□□ -2.09
PDLIM1O00151 AC093249.1-201ENST00000567049 203 ntBASIC2□□□□□ -2.09
PDLIM1O00151 AC004908.3-201ENST00000610248 625 ntBASIC2□□□□□ -2.09
PDLIM1O00151 MIR6132-201ENST00000622083 109 ntBASIC2□□□□□ -2.09
PDLIM1O00151 ATP8A2P2-201ENST00000437678 1568 ntBASIC2□□□□□ -2.09
PDLIM1O00151 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
PDLIM1O00151 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
PDLIM1O00151 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.99□□□□□ -2.09
PDLIM1O00151 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.99□□□□□ -2.09
PDLIM1O00151 RNU4-40P-201ENST00000364351 143 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 RNU4-66P-201ENST00000365199 138 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 RNU1-148P-201ENST00000384472 162 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 MIR561-201ENST00000385216 97 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 RNA5SP219-201ENST00000390940 113 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 RNA5SP489-201ENST00000410986 109 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 RNU6-293P-201ENST00000411259 106 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.99□□□□□ -2.09
PDLIM1O00151 VN1R108P-201ENST00000431580 830 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 AC007969.2-201ENST00000441891 191 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 USP9YP8-201ENST00000441913 500 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 AC009238.1-201ENST00000442165 424 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 MTND1P1-201ENST00000445453 368 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 MTCO2P7-201ENST00000446518 666 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 AC009237.6-201ENST00000446969 424 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 SNRPGP7-201ENST00000469016 106 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.99□□□□□ -2.09
PDLIM1O00151 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.99□□□□□ -2.09
PDLIM1O00151 AC009646.1-201ENST00000510455 318 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.99□□□□□ -2.09
PDLIM1O00151 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.99□□□□□ -2.09
PDLIM1O00151 AL512360.1-201ENST00000555346 234 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 AC027807.1-201ENST00000559921 996 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.99□□□□□ -2.09
PDLIM1O00151 AC107304.1-201ENST00000604229 296 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 RNU6-85P-201ENST00000605989 107 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 HULC.1-201ENST00000612720 240 ntBASIC1.99□□□□□ -2.09
PDLIM1O00151 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PDLIM1O00151 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.99□□□□□ -2.09
PDLIM1O00151 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
PDLIM1O00151 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PDLIM1O00151 Y_RNA.40-201ENST00000362645 93 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 RNU6-428P-201ENST00000362942 107 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 RNU6-623P-201ENST00000363143 105 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 RNU6-1210P-201ENST00000363775 107 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 RNU6-105P-201ENST00000363909 104 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 CALM2P3-201ENST00000400429 449 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 AL135786.1-201ENST00000415892 214 ntBASIC1.98□□□□□ -2.09
PDLIM1O00151 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.98□□□□□ -2.09
PDLIM1O00151 Z98742.3-201ENST00000418637 326 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms