Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 MIR1263-201ENST00000408324 86 ntBASIC4.48□□□□□ -1.69
H3BM21 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.48□□□□□ -1.69
H3BM21 Z74021.1-201ENST00000423610 407 ntBASIC4.48□□□□□ -1.69
H3BM21 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.48□□□□□ -1.69
H3BM21 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.48□□□□□ -1.69
H3BM21 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.48□□□□□ -1.69
H3BM21 AC006026.2-201ENST00000457376 180 ntBASIC4.48□□□□□ -1.69
H3BM21 RPL21P10-201ENST00000463521 490 ntBASIC4.48□□□□□ -1.69
H3BM21 RN7SL303P-201ENST00000469773 251 ntBASIC4.48□□□□□ -1.69
H3BM21 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.48□□□□□ -1.69
H3BM21 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.48□□□□□ -1.69
H3BM21 AL020997.2-201ENST00000602607 184 ntBASIC4.48□□□□□ -1.69
H3BM21 RNU6-94P-201ENST00000607728 107 ntBASIC4.48□□□□□ -1.69
H3BM21 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.48□□□□□ -1.69
H3BM21 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.48□□□□□ -1.69
H3BM21 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
H3BM21 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
H3BM21 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
H3BM21 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
H3BM21 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
H3BM21 AL133243.3-201ENST00000617415 3004 ntBASIC4.48□□□□□ -1.69
H3BM21 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
H3BM21 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.48□□□□□ -1.69
H3BM21 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.47□□□□□ -1.69
H3BM21 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.47□□□□□ -1.69
H3BM21 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.47□□□□□ -1.69
H3BM21 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
H3BM21 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
H3BM21 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
H3BM21 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
H3BM21 RNU1-140P-201ENST00000365040 165 ntBASIC4.47□□□□□ -1.69
H3BM21 Y_RNA.323-201ENST00000365157 109 ntBASIC4.47□□□□□ -1.69
H3BM21 SNORA70E-201ENST00000384492 135 ntBASIC4.47□□□□□ -1.69
H3BM21 Y_RNA.528-201ENST00000384575 108 ntBASIC4.47□□□□□ -1.69
H3BM21 MIR590-201ENST00000385008 97 ntBASIC4.47□□□□□ -1.69
H3BM21 MIR549A-201ENST00000385268 96 ntBASIC4.47□□□□□ -1.69
H3BM21 SNORD96B-201ENST00000386148 79 ntBASIC4.47□□□□□ -1.69
H3BM21 MIR921-201ENST00000401133 56 ntBASIC4.47□□□□□ -1.69
H3BM21 U3.37-201ENST00000408528 213 ntBASIC4.47□□□□□ -1.69
H3BM21 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.47□□□□□ -1.69
H3BM21 AL135786.1-201ENST00000415892 214 ntBASIC4.47□□□□□ -1.69
H3BM21 MTATP8P2-201ENST00000435212 202 ntBASIC4.47□□□□□ -1.69
H3BM21 RPL39P40-201ENST00000445481 146 ntBASIC4.47□□□□□ -1.69
H3BM21 AC009237.8-201ENST00000445492 379 ntBASIC4.47□□□□□ -1.69
H3BM21 AC010618.1-201ENST00000469924 477 ntBASIC4.47□□□□□ -1.69
H3BM21 AC016632.1-201ENST00000503994 196 ntBASIC4.47□□□□□ -1.69
H3BM21 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.47□□□□□ -1.69
H3BM21 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.47□□□□□ -1.69
H3BM21 IGKV1-22-201ENST00000524313 326 ntBASIC4.47□□□□□ -1.69
H3BM21 AC091178.1-203ENST00000584586 279 ntBASIC4.47□□□□□ -1.69
H3BM21 AC011944.2-201ENST00000624440 683 ntBASIC4.47□□□□□ -1.69
H3BM21 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
H3BM21 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.47□□□□□ -1.69
H3BM21 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
H3BM21 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
H3BM21 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
H3BM21 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.46□□□□□ -1.69
H3BM21 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
H3BM21 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.46□□□□□ -1.7
H3BM21 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.46□□□□□ -1.7
H3BM21 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
H3BM21 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
H3BM21 MIR570-201ENST00000384917 97 ntBASIC4.46□□□□□ -1.7
H3BM21 MIR514A1-201ENST00000385133 98 ntBASIC4.46□□□□□ -1.7
H3BM21 RNU2-32P-201ENST00000411193 191 ntBASIC4.46□□□□□ -1.7
H3BM21 RPS26P42-201ENST00000413485 326 ntBASIC4.46□□□□□ -1.7
H3BM21 AC098614.2-201ENST00000426040 255 ntBASIC4.46□□□□□ -1.7
H3BM21 RPS4XP2-201ENST00000458402 793 ntBASIC4.46□□□□□ -1.7
H3BM21 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.46□□□□□ -1.7
H3BM21 RNU6-107P-201ENST00000516643 102 ntBASIC4.46□□□□□ -1.7
H3BM21 RNU6-197P-201ENST00000516680 100 ntBASIC4.46□□□□□ -1.7
H3BM21 RNU6-158P-201ENST00000517104 100 ntBASIC4.46□□□□□ -1.7
H3BM21 RNA5SP290-201ENST00000517133 127 ntBASIC4.46□□□□□ -1.7
H3BM21 RNA5SP490-201ENST00000517141 136 ntBASIC4.46□□□□□ -1.7
H3BM21 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.46□□□□□ -1.7
H3BM21 AP004607.1-201ENST00000524456 203 ntBASIC4.46□□□□□ -1.7
H3BM21 MIR3939-201ENST00000582614 106 ntBASIC4.46□□□□□ -1.7
H3BM21 POLR3GP1-201ENST00000594073 261 ntBASIC4.46□□□□□ -1.7
H3BM21 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.46□□□□□ -1.7
H3BM21 AL022345.2-201ENST00000606307 135 ntBASIC4.46□□□□□ -1.7
H3BM21 RMST_8.1-201ENST00000610287 165 ntBASIC4.46□□□□□ -1.7
H3BM21 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
H3BM21 MIR2052-201ENST00000636055 55 ntBASIC4.46□□□□□ -1.7
H3BM21 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
H3BM21 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
H3BM21 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
H3BM21 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
H3BM21 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
H3BM21 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
H3BM21 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.46□□□□□ -1.7
H3BM21 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.45□□□□□ -1.7
H3BM21 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.45□□□□□ -1.7
H3BM21 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
H3BM21 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
H3BM21 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
H3BM21 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
H3BM21 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
H3BM21 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.45□□□□□ -1.7
H3BM21 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
H3BM21 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms