Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 AC037487.3-201ENST00000606668 112 ntBASIC3.92□□□□□ -1.78
UPK3BL1B0FP48 U3.45-201ENST00000607547 219 ntBASIC3.92□□□□□ -1.78
UPK3BL1B0FP48 MIR7975-201ENST00000619350 68 ntBASIC3.92□□□□□ -1.78
UPK3BL1B0FP48 AC006111.3-201ENST00000622137 383 ntBASIC3.92□□□□□ -1.78
UPK3BL1B0FP48 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UPK3BL1B0FP48 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
UPK3BL1B0FP48 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 RNU5F-3P-201ENST00000363767 117 ntBASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 Y_RNA.230-201ENST00000364348 109 ntBASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 AP000567.1-201ENST00000406413 156 ntBASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 RPS26P42-201ENST00000413485 326 ntBASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 AC245291.1-201ENST00000419501 328 ntBASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 AC244670.1-201ENST00000436879 112 ntBASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 AL392103.1-201ENST00000447000 198 ntBASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 Y_RNA.644-201ENST00000459006 113 ntBASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 COX6CP14-201ENST00000469580 174 ntBASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 RPS29P20-201ENST00000489592 171 ntBASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 Y_RNA.674-201ENST00000516362 113 ntBASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 AC087499.8-201ENST00000578406 226 ntBASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 MIR4298-201ENST00000584380 73 ntBASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 AC011471.1-201ENST00000585766 187 ntBASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
UPK3BL1B0FP48 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
UPK3BL1B0FP48 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
UPK3BL1B0FP48 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
UPK3BL1B0FP48 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.9□□□□□ -1.78
UPK3BL1B0FP48 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.9□□□□□ -1.78
UPK3BL1B0FP48 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
UPK3BL1B0FP48 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.9□□□□□ -1.78
UPK3BL1B0FP48 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.9□□□□□ -1.78
UPK3BL1B0FP48 MIR448-201ENST00000362131 111 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 RNA5SP361-201ENST00000362686 118 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 Y_RNA.199-201ENST00000364014 102 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 U3.19-201ENST00000390893 196 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 SNORA26.3-201ENST00000391119 136 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 Y_RNA.793-201ENST00000411222 111 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 AC004552.1-201ENST00000419089 348 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 AC005300.1-201ENST00000428401 373 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 SNORA59A-201ENST00000459326 152 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 RNU7-23P-201ENST00000459465 62 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 AC010469.1-201ENST00000463864 576 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 RPS26P3-201ENST00000470205 348 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 AC107626.1-201ENST00000471084 183 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 AC090543.2-201ENST00000483963 348 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 AC004057.1-201ENST00000485827 348 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 RNU6-581P-201ENST00000516214 105 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 CYCSP23-201ENST00000519781 313 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 AP000867.2-201ENST00000532468 320 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 CBX3P4-201ENST00000538909 354 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 BRDTP1-201ENST00000605735 677 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 AC012531.5-201ENST00000611375 151 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 AC068831.7-201ENST00000616954 363 ntBASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.9□□□□□ -1.79
UPK3BL1B0FP48 LINC02471-203ENST00000641941 4752 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 AF127577.6-201ENST00000623352 2191 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 RNU6-626P-201ENST00000363354 107 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 RNU6-1285P-201ENST00000363480 105 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 Y_RNA.150-201ENST00000363562 102 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 Y_RNA.464-201ENST00000384282 110 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 Y_RNA.569-201ENST00000384749 103 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 MIR199A2-201ENST00000385289 110 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 HLFP1-201ENST00000402375 499 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 Z92545.1-201ENST00000411782 234 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 RPS29P4-201ENST00000414733 161 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 MTCO1P5-201ENST00000433573 344 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 AL161651.1-201ENST00000440882 223 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 NDUFB4P10-201ENST00000452541 359 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 AC117440.1-201ENST00000474107 571 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 RN7SL293P-201ENST00000481765 281 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 AC106707.2-201ENST00000484182 374 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 RNU6-406P-201ENST00000516470 107 ntBASIC3.89□□□□□ -1.79
UPK3BL1B0FP48 ACA59.2-201ENST00000517061 156 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms