Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC138649.3-201ENST00000622154 254 ntBASIC1.14□□□□□ -2.23
RBFOX3A6NFN3 AP000560.1-201ENST00000624150 1937 ntBASIC1.14□□□□□ -2.23
RBFOX3A6NFN3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 ZNF72P-201ENST00000425869 1908 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 RNA5SP190-201ENST00000365222 118 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 RNU6-26P-201ENST00000383985 107 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 RNU6-142P-201ENST00000384019 107 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 RNU6-296P-201ENST00000384608 107 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 AL627390.1-201ENST00000396055 340 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 RNU2-8P-201ENST00000410727 190 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 AC123900.1-201ENST00000420390 96 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 UBE2V1P8-201ENST00000437166 265 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 MTND1P30-201ENST00000441241 901 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 AL022238.1-201ENST00000442557 355 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 ART2BP-201ENST00000453501 499 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 AMD1P1-201ENST00000457220 922 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 MTND3P5-201ENST00000512798 333 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 Y_RNA.672-201ENST00000516289 104 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 RNU6-250P-201ENST00000516958 103 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 AC002400.1-201ENST00000569310 726 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 SNORA77B-201ENST00000578179 125 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 MIR4769-201ENST00000584126 77 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 AC009977.1-201ENST00000586015 570 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 AC008751.2-201ENST00000597885 980 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 AC104073.3-201ENST00000610942 955 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 MIR7844-201ENST00000616161 122 ntBASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
RBFOX3A6NFN3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 RNU6-414P-201ENST00000363705 104 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 SNORD26-201ENST00000384147 75 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 RNU6-925P-201ENST00000384629 104 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 MIR758-201ENST00000390227 88 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 SNORA12-201ENST00000391162 147 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 RNU6-1245P-201ENST00000411130 106 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 RPL30P13-201ENST00000418873 348 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 CYCSP49-201ENST00000420810 319 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC015922.2-201ENST00000435593 184 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC243964.1-201ENST00000441814 261 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC099513.1-201ENST00000490423 301 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC098862.1-201ENST00000504991 413 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC116562.3-201ENST00000506136 177 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC074344.1-201ENST00000512823 224 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 MIR449C-201ENST00000516047 92 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 RN7SKP219-201ENST00000516825 296 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 RNU6-902P-201ENST00000517212 91 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC068587.5-201ENST00000528506 175 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC022878.1-201ENST00000530684 149 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC112191.3-201ENST00000604371 277 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AL121992.2-201ENST00000606262 256 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC097372.5-201ENST00000623665 376 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 SNORD98-201ENST00000636377 67 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC007671.2-201ENST00000637344 619 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 AC091812.1-201ENST00000432235 1948 ntBASIC1.12□□□□□ -2.23
RBFOX3A6NFN3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 MIR340-201ENST00000362125 95 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 MIR302D-201ENST00000362275 68 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 RNU1-17P-201ENST00000363022 152 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 RNU6-271P-201ENST00000363858 105 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 RNY1P12-201ENST00000364251 105 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 RNU6-1141P-201ENST00000364520 107 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 Y_RNA.576-201ENST00000384781 102 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 MTCYBP2-201ENST00000407745 171 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 MIR1267-201ENST00000408723 78 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 OR6C66P-201ENST00000414917 930 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 MTATP6P16-201ENST00000434543 526 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 MTND2P14-201ENST00000482139 351 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 AC104136.1-201ENST00000512969 394 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 SNORA3.4-201ENST00000515969 96 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 SCARNA24.1-201ENST00000516465 137 ntBASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.11□□□□□ -2.23
RBFOX3A6NFN3 SNORD53B-201ENST00000577887 78 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms