Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC092628.2-201ENST00000622492 339 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 snoU18.1-201ENST00000629629 71 ntBASIC3.59□□□□□ -1.83
SHISA3A0PJX4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
SHISA3A0PJX4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.59□□□□□ -1.83
SHISA3A0PJX4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
SHISA3A0PJX4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.84
SHISA3A0PJX4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.59□□□□□ -1.84
SHISA3A0PJX4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
SHISA3A0PJX4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SHISA3A0PJX4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
SHISA3A0PJX4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHISA3A0PJX4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHISA3A0PJX4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.58□□□□□ -1.84
SHISA3A0PJX4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHISA3A0PJX4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
SHISA3A0PJX4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.58□□□□□ -1.84
SHISA3A0PJX4 AC079741.1-201ENST00000321498 212 ntBASIC3.58□□□□□ -1.84
SHISA3A0PJX4 RNU6-1010P-201ENST00000362757 107 ntBASIC3.58□□□□□ -1.84
SHISA3A0PJX4 RNU6-1272P-201ENST00000362776 107 ntBASIC3.58□□□□□ -1.84
SHISA3A0PJX4 RNU6-19P-201ENST00000384718 107 ntBASIC3.58□□□□□ -1.84
SHISA3A0PJX4 MIR708-201ENST00000390708 88 ntBASIC3.58□□□□□ -1.84
SHISA3A0PJX4 AL357139.1-201ENST00000407792 426 ntBASIC3.58□□□□□ -1.84
SHISA3A0PJX4 RNA5SP475-201ENST00000410568 110 ntBASIC3.58□□□□□ -1.84
SHISA3A0PJX4 RNU6-1135P-201ENST00000411083 103 ntBASIC3.58□□□□□ -1.84
SHISA3A0PJX4 AC009963.1-201ENST00000417265 157 ntBASIC3.58□□□□□ -1.84
SHISA3A0PJX4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.58□□□□□ -1.84
SHISA3A0PJX4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.58□□□□□ -1.84
SHISA3A0PJX4 snoU13.14-201ENST00000459372 104 ntBASIC3.58□□□□□ -1.84
SHISA3A0PJX4 UQCRHP4-201ENST00000471686 272 ntBASIC3.58□□□□□ -1.84
SHISA3A0PJX4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.58□□□□□ -1.84
SHISA3A0PJX4 MTND5P41-201ENST00000517498 206 ntBASIC3.58□□□□□ -1.84
SHISA3A0PJX4 TRAV8-5-201ENST00000537369 341 ntBASIC3.58□□□□□ -1.84
SHISA3A0PJX4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.58□□□□□ -1.84
SHISA3A0PJX4 AL133393.1-201ENST00000603277 287 ntBASIC3.58□□□□□ -1.84
SHISA3A0PJX4 uc_338.13-201ENST00000618243 179 ntBASIC3.58□□□□□ -1.84
SHISA3A0PJX4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHISA3A0PJX4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHISA3A0PJX4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHISA3A0PJX4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHISA3A0PJX4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHISA3A0PJX4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SHISA3A0PJX4 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SHISA3A0PJX4 CBX3P9-201ENST00000402326 552 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 AC016397.1-201ENST00000412463 242 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 DNAJC19P7-201ENST00000428811 344 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.57□□□□□ -1.84
SHISA3A0PJX4 RPS15AP5-201ENST00000436276 388 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.57□□□□□ -1.84
SHISA3A0PJX4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.57□□□□□ -1.84
SHISA3A0PJX4 snoU13.28-201ENST00000459235 104 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 RN7SL481P-201ENST00000477764 299 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 RPL30P14-201ENST00000482744 348 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 AL592156.1-201ENST00000508758 304 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 AC026726.1-201ENST00000512859 601 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 RNU6-346P-201ENST00000516288 111 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 AC027176.1-201ENST00000560204 514 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.57□□□□□ -1.84
SHISA3A0PJX4 RPS15AP11-201ENST00000594193 385 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 AC006380.1-201ENST00000603598 186 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 AC113403.1-201ENST00000604910 193 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 AC104465.1-201ENST00000611365 139 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 AC002076.2-201ENST00000617362 122 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 MTND1P7-201ENST00000632801 297 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHISA3A0PJX4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHISA3A0PJX4 IPO8P1-201ENST00000455509 3109 ntBASIC3.57□□□□□ -1.84
SHISA3A0PJX4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.57□□□□□ -1.84
SHISA3A0PJX4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
SHISA3A0PJX4 UBE3AP2-201ENST00000429033 2259 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SHISA3A0PJX4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SHISA3A0PJX4 Y_RNA.8-201ENST00000362353 102 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 RNU1-14P-201ENST00000362759 152 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 RNU6-81P-201ENST00000365608 104 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 RNU6-1264P-201ENST00000383891 107 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 Y_RNA.398-201ENST00000383952 99 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 Y_RNA.580-201ENST00000391004 95 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 U3.39-201ENST00000408569 239 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.56□□□□□ -1.84
SHISA3A0PJX4 AC096649.2-201ENST00000416186 393 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 RPEP3-201ENST00000425462 676 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 AL714022.1-201ENST00000439897 151 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 RPS29P33-201ENST00000456717 146 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 AP002884.2-201ENST00000471647 395 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 RN7SL691P-201ENST00000494487 301 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 AC146944.2-203ENST00000502493 354 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 AC139495.1-202ENST00000513164 354 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 RNA5SP519-201ENST00000516480 119 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.56□□□□□ -1.84
SHISA3A0PJX4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.56□□□□□ -1.84
SHISA3A0PJX4 MIR3145-201ENST00000580727 82 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.56□□□□□ -1.84
SHISA3A0PJX4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.56□□□□□ -1.84
SHISA3A0PJX4 AP000346.3-201ENST00000622821 210 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 AC140479.6-201ENST00000633535 357 ntBASIC3.56□□□□□ -1.84
SHISA3A0PJX4 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SHISA3A0PJX4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SHISA3A0PJX4 RNA5SP505-201ENST00000364748 108 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 SNORA56-201ENST00000383966 129 ntBASIC3.55□□□□□ -1.84
SHISA3A0PJX4 RNU6-1081P-201ENST00000384537 107 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms