Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDHGA4Q9Y5G9 HMGN2P20-201ENST00000437531 273 ntBASIC5.11□□□□□ -1.59
PCDHGA4Q9Y5G9 AC009220.1-201ENST00000451614 275 ntBASIC5.11□□□□□ -1.59
PCDHGA4Q9Y5G9 AL645939.1-201ENST00000453429 797 ntBASIC5.11□□□□□ -1.59
PCDHGA4Q9Y5G9 RPL35AP15-201ENST00000468042 339 ntBASIC5.11□□□□□ -1.59
PCDHGA4Q9Y5G9 RNU6-904P-201ENST00000516206 101 ntBASIC5.11□□□□□ -1.59
PCDHGA4Q9Y5G9 AC007751.1-201ENST00000529260 376 ntBASIC5.11□□□□□ -1.59
PCDHGA4Q9Y5G9 AC141557.1-201ENST00000540982 400 ntBASIC5.11□□□□□ -1.59
PCDHGA4Q9Y5G9 MIR4330-201ENST00000579077 105 ntBASIC5.11□□□□□ -1.59
PCDHGA4Q9Y5G9 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA4Q9Y5G9 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PCDHGA4Q9Y5G9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA4Q9Y5G9 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA4Q9Y5G9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDHGA4Q9Y5G9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 Y_RNA.111-201ENST00000363248 100 ntBASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 RNA5SP28-201ENST00000363841 119 ntBASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 Y_RNA.366-201ENST00000365540 102 ntBASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 SNORA1.3-201ENST00000384676 136 ntBASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 MIR141-201ENST00000384975 95 ntBASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 MIR586-201ENST00000385035 97 ntBASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 IFNWP4-201ENST00000453148 294 ntBASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 AC145146.1-201ENST00000496370 254 ntBASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 RPL23AP91-201ENST00000569211 455 ntBASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 MIR4662B-201ENST00000579498 81 ntBASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PCDHGA4Q9Y5G9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA4Q9Y5G9 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA4Q9Y5G9 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA4Q9Y5G9 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA4Q9Y5G9 Y_RNA.17-201ENST00000362433 111 ntBASIC5.09□□□□□ -1.59
PCDHGA4Q9Y5G9 Y_RNA.198-201ENST00000364013 98 ntBASIC5.09□□□□□ -1.59
PCDHGA4Q9Y5G9 MIR195-201ENST00000385194 87 ntBASIC5.09□□□□□ -1.59
PCDHGA4Q9Y5G9 PPIAP31-201ENST00000405422 495 ntBASIC5.09□□□□□ -1.59
PCDHGA4Q9Y5G9 AC016397.1-201ENST00000412463 242 ntBASIC5.09□□□□□ -1.59
PCDHGA4Q9Y5G9 AL445584.1-201ENST00000431451 330 ntBASIC5.09□□□□□ -1.59
PCDHGA4Q9Y5G9 RNA5SP497-201ENST00000516081 97 ntBASIC5.09□□□□□ -1.59
PCDHGA4Q9Y5G9 RNA5SP373-201ENST00000517271 95 ntBASIC5.09□□□□□ -1.59
PCDHGA4Q9Y5G9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
PCDHGA4Q9Y5G9 Pinc.1-201ENST00000616452 154 ntBASIC5.09□□□□□ -1.59
PCDHGA4Q9Y5G9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA4Q9Y5G9 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA4Q9Y5G9 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
PCDHGA4Q9Y5G9 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PCDHGA4Q9Y5G9 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 AL450345.1-202ENST00000605741 3881 ntBASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 AP000542.2-201ENST00000623199 6179 ntBASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 MIR493-201ENST00000385254 89 ntBASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 AC009237.10-201ENST00000414112 510 ntBASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 COX5BP7-201ENST00000414780 274 ntBASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 AL353705.1-201ENST00000433468 480 ntBASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 NDUFB4P6-201ENST00000436819 366 ntBASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 RPS29P20-201ENST00000489592 171 ntBASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA4Q9Y5G9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA4Q9Y5G9 Y_RNA.107-201ENST00000363190 121 ntBASIC5.07□□□□□ -1.6
PCDHGA4Q9Y5G9 RNU6-529P-201ENST00000363383 104 ntBASIC5.07□□□□□ -1.6
PCDHGA4Q9Y5G9 MIR105-1-201ENST00000385222 81 ntBASIC5.07□□□□□ -1.6
PCDHGA4Q9Y5G9 NDUFB1P1-201ENST00000435191 180 ntBASIC5.07□□□□□ -1.6
PCDHGA4Q9Y5G9 RPL39P39-201ENST00000455840 151 ntBASIC5.07□□□□□ -1.6
PCDHGA4Q9Y5G9 RNU6-893P-201ENST00000458841 100 ntBASIC5.07□□□□□ -1.6
PCDHGA4Q9Y5G9 AC022137.1-201ENST00000483735 151 ntBASIC5.07□□□□□ -1.6
PCDHGA4Q9Y5G9 RN7SKP21-201ENST00000516503 220 ntBASIC5.07□□□□□ -1.6
PCDHGA4Q9Y5G9 uc_338.18-201ENST00000615451 175 ntBASIC5.07□□□□□ -1.6
PCDHGA4Q9Y5G9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC5.07□□□□□ -1.6
PCDHGA4Q9Y5G9 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
PCDHGA4Q9Y5G9 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms