Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 RNU6-222P-201ENST00000362438 107 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 RNU6-884P-201ENST00000363889 107 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 Y_RNA.439-201ENST00000384119 94 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 Y_RNA.515-201ENST00000384535 112 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 MIR200C-201ENST00000384980 68 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 MIR548I3-201ENST00000408378 149 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 MIR548I1-201ENST00000408810 149 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 YPEL5P1-201ENST00000419731 367 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 AL591043.1-201ENST00000432461 424 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 AC243964.1-201ENST00000441814 261 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 AL590664.1-201ENST00000448065 339 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 SNORA84-201ENST00000459229 133 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 MIR2355-201ENST00000517199 87 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 IGKV2D-19-201ENST00000523346 262 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 AC093023.1-201ENST00000547375 507 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 TGIF1P1-201ENST00000558095 802 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 AC090617.3-201ENST00000573670 475 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 AC136932.1-201ENST00000574771 208 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 MIR4300-201ENST00000581016 96 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 AC012468.1-201ENST00000604888 430 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 MIR376A1-201ENST00000616574 68 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 AL513302.2-201ENST00000562313 1842 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 AC022336.2-201ENST00000568966 2538 ntBASIC3.69□□□□□ -1.82
PCDHB4Q9Y5E5 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 RNU4-35P-201ENST00000362588 141 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 Y_RNA.478-201ENST00000384358 107 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 SNORD17-201ENST00000390930 237 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 MIR888-201ENST00000401186 77 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 RNA5SP44-201ENST00000410446 133 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 AC096920.1-201ENST00000423991 241 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 AC009296.1-201ENST00000443146 155 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 AL031659.1-201ENST00000447075 539 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 AL353705.4-201ENST00000449661 238 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 RPL30P1-201ENST00000488676 339 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 RPL23AP75-201ENST00000491601 451 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 HMGB3P17-201ENST00000504195 649 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 AC026784.1-201ENST00000507986 352 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 AC091874.1-201ENST00000511402 339 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 RN7SKP272-201ENST00000516988 232 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 Y_RNA.713-201ENST00000517013 96 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 RNU6-111P-201ENST00000517179 105 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 RPL23AP88-201ENST00000605759 454 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 RNVU1-4-201ENST00000612985 164 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 MIR6134-201ENST00000617606 109 ntBASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDHB4Q9Y5E5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 snoU2_19.2-201ENST00000363024 80 ntBASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 RNU1-100P-201ENST00000365255 165 ntBASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 RNU6-1286P-201ENST00000383871 107 ntBASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 Y_RNA.416-201ENST00000384014 113 ntBASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 SNORD116-20-201ENST00000384529 92 ntBASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 SNORD115-46-201ENST00000390982 71 ntBASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 TMEM167AP1-201ENST00000423409 219 ntBASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 AP000907.1-201ENST00000428428 510 ntBASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 HMGN2P31-201ENST00000432430 273 ntBASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 AC093331.1-201ENST00000521474 169 ntBASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 MIR3158-1-201ENST00000583596 81 ntBASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 AC006133.1-201ENST00000617106 264 ntBASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 SNORA50A-202ENST00000629536 136 ntBASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB4Q9Y5E5 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDHB4Q9Y5E5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PCDHB4Q9Y5E5 Y_RNA.20-201ENST00000362479 113 ntBASIC3.66□□□□□ -1.82
PCDHB4Q9Y5E5 Y_RNA.237-201ENST00000364439 102 ntBASIC3.66□□□□□ -1.82
PCDHB4Q9Y5E5 RNU6-17P-201ENST00000384245 107 ntBASIC3.66□□□□□ -1.82
PCDHB4Q9Y5E5 RNU6-18P-201ENST00000384527 107 ntBASIC3.66□□□□□ -1.82
PCDHB4Q9Y5E5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHB4Q9Y5E5 HSPE1P26-201ENST00000405341 275 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms