Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 MIR4738-201ENST00000579134 87 ntBASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 AL670379.2-201ENST00000604983 252 ntBASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 AC007619.2-201ENST00000605743 379 ntBASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 MIR1244-1-201ENST00000612829 85 ntBASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 MIR7111-201ENST00000619751 72 ntBASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 MIR1244-3-201ENST00000635744 85 ntBASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 MIR1244-2-201ENST00000636449 85 ntBASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 MIR1244-4-202ENST00000636813 85 ntBASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 AC110774.1-201ENST00000623567 2018 ntBASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.78□□□□□ -1.64
COL17A1Q9UMD9 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.65
COL17A1Q9UMD9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 Y_RNA.238-201ENST00000364441 102 ntBASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 SNORA16.2-201ENST00000390991 127 ntBASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 RNU6-918P-201ENST00000391219 106 ntBASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 RNA5SP247-201ENST00000411181 105 ntBASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 RPL23AP82-202ENST00000427528 469 ntBASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 snoU13.15-201ENST00000459407 104 ntBASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 CENPBD1P1-201ENST00000464061 469 ntBASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 RPL31P60-201ENST00000478450 367 ntBASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 RNU6-1333P-201ENST00000516162 93 ntBASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 AC027288.2-201ENST00000553028 243 ntBASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 AL450326.2-201ENST00000421913 1962 ntBASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
COL17A1Q9UMD9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 RNU6-989P-201ENST00000362756 107 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 Y_RNA.292-201ENST00000364904 97 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 RNU6-715P-201ENST00000365204 103 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 MIR625-201ENST00000385047 85 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 RNU6-257P-201ENST00000410238 98 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 AC092447.6-201ENST00000414578 210 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 RAB28P5-201ENST00000427490 651 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 AC008264.1-201ENST00000447612 367 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 COX6CP14-201ENST00000469580 174 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 RPL21P103-201ENST00000479921 488 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 RPS4XP13-201ENST00000483219 789 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 RNU2-69P-201ENST00000516061 100 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 Y_RNA.689-201ENST00000516589 107 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 ATP5F1P5-201ENST00000526403 760 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 MIR3613-201ENST00000579844 87 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 AC006023.2-201ENST00000609916 167 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 MIR376A1-201ENST00000616574 68 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 MTND1P7-201ENST00000632801 297 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 AC008568.2-201ENST00000623862 2313 ntBASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
COL17A1Q9UMD9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 Y_RNA.127-201ENST00000363386 109 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 Y_RNA.151-201ENST00000363566 112 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 Y_RNA.272-201ENST00000364696 102 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 AC063976.3-201ENST00000426849 329 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 AP000926.1-201ENST00000479573 241 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 RNU6-1219P-201ENST00000516143 112 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 RN7SKP234-201ENST00000517173 224 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 AC126177.3-201ENST00000551839 688 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 AC136932.1-201ENST00000574771 208 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 uc_338.25-201ENST00000613756 156 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 AF117829.1-206ENST00000621883 3802 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 AL513302.2-201ENST00000562313 1842 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 RNU1-76P-201ENST00000362903 159 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 RNY1P16-201ENST00000363063 111 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 MIR186-201ENST00000384988 86 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 MIR517A-201ENST00000385001 87 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 HMGB1P27-201ENST00000431429 603 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 RNU7-187P-201ENST00000458985 68 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 RNU6-426P-201ENST00000516464 97 ntBASIC4.75□□□□□ -1.65
COL17A1Q9UMD9 RNU6-840P-201ENST00000517275 65 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms