Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 RPS27P1-201ENST00000450552 247 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 HSPE1P13-201ENST00000451143 297 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 VWA8P1-201ENST00000510889 176 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 SCARNA8-201ENST00000515924 131 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 SNORA70.14-201ENST00000516205 110 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 RNU2-12P-201ENST00000517216 168 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 HSPE1P4-201ENST00000550617 308 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 CYCSP39-201ENST00000565821 309 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 Y_RNA.757-201ENST00000578934 114 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 MIR6716-201ENST00000613413 80 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 AC010329.5-201ENST00000623497 2174 ntBASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.51□□□□□ -1.69
CUEDC1Q9NWM3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 AC015813.6-201ENST00000624409 5808 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 AC027290.2-201ENST00000623210 18662 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 AC092268.1-201ENST00000342691 405 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-915P-201ENST00000364943 103 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-768P-201ENST00000384683 107 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 MIR15B-201ENST00000385045 98 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 SNORA26.5-201ENST00000391215 123 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 RPL21P17-201ENST00000397467 475 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 U3.40-201ENST00000408706 208 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 AC096649.2-201ENST00000416186 393 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 AIMP1P2-201ENST00000425294 312 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 AC078809.1-201ENST00000427601 140 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 HMGB3P8-201ENST00000449709 577 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 LINC00933-203ENST00000559812 219 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 AC034229.5-201ENST00000624258 185 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 ZFRP1-201ENST00000457579 2970 ntBASIC4.5□□□□□ -1.69
CUEDC1Q9NWM3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 DHX9P1-201ENST00000436565 3076 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 AL672167.1-203ENST00000641299 2975 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 Y_RNA.24-201ENST00000362508 103 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 RNU1-83P-201ENST00000363426 164 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-1228P-201ENST00000391014 107 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 SNORA75.5-201ENST00000391291 81 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 RPL23AP82-202ENST00000427528 469 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 AC007969.2-201ENST00000441891 191 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 RPL37P4-201ENST00000448908 268 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 AC007215.1-201ENST00000464893 276 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-453P-201ENST00000516819 85 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 RNU6-703P-201ENST00000516946 107 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 HIGD1AP1-201ENST00000550979 275 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 AL356575.1-201ENST00000603008 283 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 HSPE1P7-201ENST00000604681 321 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 AC019159.1-201ENST00000605094 187 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 AC007496.3-201ENST00000624987 3443 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 MAPK10-372ENST00000641954 3413 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 AL136164.4-201ENST00000625013 2135 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 AC139713.2-215ENST00000641428 5037 ntBASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CUEDC1Q9NWM3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CUEDC1Q9NWM3 Y_RNA.116-201ENST00000363292 103 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms