Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 AC006512.1-201ENST00000468816 291 ntBASIC2.1□□□□□ -2.07
RBM28Q9NW13 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.1□□□□□ -2.07
RBM28Q9NW13 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.1□□□□□ -2.07
RBM28Q9NW13 AC079140.3-201ENST00000511111 550 ntBASIC2.1□□□□□ -2.07
RBM28Q9NW13 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
RBM28Q9NW13 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.1□□□□□ -2.07
RBM28Q9NW13 PSMA3P-201ENST00000555485 635 ntBASIC2.1□□□□□ -2.07
RBM28Q9NW13 AC233702.2-202ENST00000562547 291 ntBASIC2.1□□□□□ -2.07
RBM28Q9NW13 AC136619.2-201ENST00000563361 631 ntBASIC2.1□□□□□ -2.07
RBM28Q9NW13 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.1□□□□□ -2.07
RBM28Q9NW13 RN7SKP299-201ENST00000606679 301 ntBASIC2.1□□□□□ -2.07
RBM28Q9NW13 AC091834.1-201ENST00000614543 472 ntBASIC2.1□□□□□ -2.07
RBM28Q9NW13 U6.114-201ENST00000636407 96 ntBASIC2.1□□□□□ -2.07
RBM28Q9NW13 RBBP8P1-201ENST00000449447 1844 ntBASIC2.1□□□□□ -2.07
RBM28Q9NW13 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.09□□□□□ -2.07
RBM28Q9NW13 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
RBM28Q9NW13 OR4G2P-201ENST00000328113 903 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 RNA5SP432-201ENST00000362480 116 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 RNU6-1287P-201ENST00000362914 107 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 RNU4-42P-201ENST00000364738 142 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 Y_RNA.381-201ENST00000365666 102 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 RNU6-1060P-201ENST00000384664 107 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 RNU6-482P-201ENST00000391068 107 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 SNORA40.18-201ENST00000391200 128 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 HMGN2P39-201ENST00000398005 273 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 RNU2-3P-201ENST00000410144 191 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 CYCSP33-201ENST00000414485 327 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 AL669831.1-202ENST00000428504 417 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.09□□□□□ -2.07
RBM28Q9NW13 RPL7P54-201ENST00000438336 674 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 GTF2IP13-201ENST00000438487 386 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.09□□□□□ -2.07
RBM28Q9NW13 AC022364.2-201ENST00000457963 554 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 RPS29P11-201ENST00000496507 171 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.09□□□□□ -2.07
RBM28Q9NW13 SNORA48.11-201ENST00000517015 89 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 RNU6-548P-201ENST00000517083 115 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 MTCO2P4-201ENST00000517968 247 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.09□□□□□ -2.07
RBM28Q9NW13 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.09□□□□□ -2.07
RBM28Q9NW13 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.09□□□□□ -2.07
RBM28Q9NW13 AC021646.1-201ENST00000605469 484 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 AC109347.2-201ENST00000610220 349 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 AC008121.3-201ENST00000618726 433 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 uc_338.11-201ENST00000619132 160 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.09□□□□□ -2.07
RBM28Q9NW13 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.09□□□□□ -2.07
RBM28Q9NW13 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.09□□□□□ -2.07
RBM28Q9NW13 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RBM28Q9NW13 AL356292.1-201ENST00000283110 373 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 RNU6-715P-201ENST00000365204 103 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 SNORD116-9-201ENST00000384000 95 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 SNORD116-3-201ENST00000384287 95 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 SNORD116-7-201ENST00000384404 95 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 SNORD116-5-201ENST00000384462 95 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 AL365400.1-201ENST00000431854 640 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 IFNA20P-201ENST00000436840 528 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 RNU7-182P-201ENST00000459009 62 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 AC140059.1-201ENST00000489238 361 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 AC104136.1-201ENST00000512969 394 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 SNORA4.4-201ENST00000515921 135 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 RNU6-295P-201ENST00000516901 104 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 RNA5SP503-201ENST00000517047 117 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 AP005639.2-201ENST00000527592 928 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 AP002963.1-201ENST00000530590 184 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.08□□□□□ -2.08
RBM28Q9NW13 HSBP1P1-201ENST00000555205 166 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 AL391840.1-201ENST00000571144 367 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.08□□□□□ -2.08
RBM28Q9NW13 AC008752.3-201ENST00000588113 712 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 MIR6845-201ENST00000613182 61 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 RMST_4.1-201ENST00000616886 107 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 AC072046.2-201ENST00000618366 268 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 AC009161.2-201ENST00000624626 138 ntBASIC2.08□□□□□ -2.08
RBM28Q9NW13 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
RBM28Q9NW13 ZNF72P-201ENST00000425869 1908 ntBASIC2.07□□□□□ -2.08
RBM28Q9NW13 U3.13-201ENST00000364804 214 ntBASIC2.07□□□□□ -2.08
RBM28Q9NW13 RNU4-48P-201ENST00000365559 182 ntBASIC2.07□□□□□ -2.08
RBM28Q9NW13 SNORA40.19-201ENST00000390846 128 ntBASIC2.07□□□□□ -2.08
RBM28Q9NW13 CDK8P2-201ENST00000415020 547 ntBASIC2.07□□□□□ -2.08
RBM28Q9NW13 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.07□□□□□ -2.08
RBM28Q9NW13 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.07□□□□□ -2.08
RBM28Q9NW13 AL596276.1-201ENST00000434465 418 ntBASIC2.07□□□□□ -2.08
RBM28Q9NW13 MTND2P22-201ENST00000444325 1033 ntBASIC2.07□□□□□ -2.08
RBM28Q9NW13 RPL31P3-201ENST00000458430 332 ntBASIC2.07□□□□□ -2.08
RBM28Q9NW13 RNU6-1178P-201ENST00000516674 107 ntBASIC2.07□□□□□ -2.08
RBM28Q9NW13 BNIP3P6-201ENST00000549284 499 ntBASIC2.07□□□□□ -2.08
RBM28Q9NW13 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.07□□□□□ -2.08
RBM28Q9NW13 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.07□□□□□ -2.08
RBM28Q9NW13 MIR4419B-201ENST00000577260 68 ntBASIC2.07□□□□□ -2.08
RBM28Q9NW13 MIR4703-201ENST00000577728 79 ntBASIC2.07□□□□□ -2.08
RBM28Q9NW13 MTND1P15-201ENST00000579262 949 ntBASIC2.07□□□□□ -2.08
RBM28Q9NW13 MIR4769-201ENST00000584126 77 ntBASIC2.07□□□□□ -2.08
RBM28Q9NW13 AL031274.2-201ENST00000599419 203 ntBASIC2.07□□□□□ -2.08
RBM28Q9NW13 BNIP3P30-201ENST00000601184 574 ntBASIC2.07□□□□□ -2.08
RBM28Q9NW13 AL391646.1-201ENST00000603860 190 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms