Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 ACA64.1-201ENST00000459171 127 ntBASIC6.39□□□□□ -1.39
FOXD4L1Q9NU39 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXD4L1Q9NU39 uc_338.7-201ENST00000621834 124 ntBASIC6.39□□□□□ -1.39
FOXD4L1Q9NU39 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.39□□□□□ -1.39
FOXD4L1Q9NU39 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
FOXD4L1Q9NU39 AC011266.1-201ENST00000624119 3569 ntBASIC6.39□□□□□ -1.39
FOXD4L1Q9NU39 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC6.39□□□□□ -1.39
FOXD4L1Q9NU39 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 RNA5SP131-201ENST00000365452 119 ntBASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 RNU6-1124P-201ENST00000384169 107 ntBASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 DBIP2-201ENST00000419076 262 ntBASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 HMGN2P27-201ENST00000427352 270 ntBASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 RPL23AP52-201ENST00000439311 478 ntBASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 RN7SKP260-201ENST00000516907 149 ntBASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 RNU6-1231P-201ENST00000517185 103 ntBASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 AC107958.1-201ENST00000556576 290 ntBASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 MRPS21P7-201ENST00000566937 238 ntBASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 AC103810.1-201ENST00000579873 453 ntBASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 AC021443.1-201ENST00000604478 211 ntBASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 MIR3202-2-201ENST00000635980 79 ntBASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
FOXD4L1Q9NU39 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 AL592182.3-201ENST00000642132 3304 ntBASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 PCAT14-202ENST00000627127 3935 ntBASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 RNU4-36P-201ENST00000364294 144 ntBASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 Y_RNA.344-201ENST00000365381 112 ntBASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 MIR548A2-201ENST00000384956 97 ntBASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 MIR1282-201ENST00000408865 101 ntBASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 RN7SKP209-201ENST00000516888 304 ntBASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 AC005363.1-201ENST00000530779 351 ntBASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 AC008507.4-201ENST00000585464 127 ntBASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
FOXD4L1Q9NU39 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 RNU6-486P-201ENST00000363116 107 ntBASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 MIR548D2-201ENST00000384955 97 ntBASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 RPL21P65-201ENST00000406094 466 ntBASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 RNA5SP225-201ENST00000410874 135 ntBASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 AL035660.1-201ENST00000422041 222 ntBASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 HMGN2P31-201ENST00000432430 273 ntBASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 AL445687.1-201ENST00000439946 251 ntBASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 RPL39P25-201ENST00000449384 154 ntBASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 HMGN2P16-201ENST00000456802 261 ntBASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 RNU6-893P-201ENST00000458841 100 ntBASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 SNORA70.20-201ENST00000516848 126 ntBASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 IGKV2-18-201ENST00000522607 343 ntBASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 AP004607.2-201ENST00000533949 322 ntBASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 AC022217.4-201ENST00000604389 163 ntBASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 AL591926.1-201ENST00000620542 217 ntBASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
FOXD4L1Q9NU39 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 AL049781.1-201ENST00000623195 3585 ntBASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 AC104623.2-202ENST00000623477 4002 ntBASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 Z95331.1-201ENST00000623075 23112 ntBASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 RNU6-228P-201ENST00000362700 106 ntBASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 RNU6-944P-201ENST00000364023 107 ntBASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 RNU6-813P-201ENST00000384691 107 ntBASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 BMS1P17-202ENST00000416720 316 ntBASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 RNU7-70P-201ENST00000516941 66 ntBASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 SNORA43.3-201ENST00000517240 103 ntBASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 DEFB131E-201ENST00000532329 154 ntBASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 AC024884.1-201ENST00000620583 399 ntBASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
FOXD4L1Q9NU39 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms