Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 RNA5SP425-201ENST00000410336 112 ntBASIC2.83□□□□□ -1.96
DDX4Q9NQI0 VN1R36P-201ENST00000414936 291 ntBASIC2.83□□□□□ -1.96
DDX4Q9NQI0 AC016831.2-201ENST00000417179 352 ntBASIC2.83□□□□□ -1.96
DDX4Q9NQI0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.83□□□□□ -1.96
DDX4Q9NQI0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.83□□□□□ -1.96
DDX4Q9NQI0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.83□□□□□ -1.96
DDX4Q9NQI0 MTCO1P29-201ENST00000496868 288 ntBASIC2.83□□□□□ -1.96
DDX4Q9NQI0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.83□□□□□ -1.96
DDX4Q9NQI0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.83□□□□□ -1.96
DDX4Q9NQI0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.83□□□□□ -1.96
DDX4Q9NQI0 COPS8P3-201ENST00000526024 482 ntBASIC2.83□□□□□ -1.96
DDX4Q9NQI0 COX6CP5-201ENST00000527162 228 ntBASIC2.83□□□□□ -1.96
DDX4Q9NQI0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.83□□□□□ -1.96
DDX4Q9NQI0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.83□□□□□ -1.96
DDX4Q9NQI0 AC100830.2-201ENST00000581636 240 ntBASIC2.83□□□□□ -1.96
DDX4Q9NQI0 AC023043.2-201ENST00000589678 1026 ntBASIC2.83□□□□□ -1.96
DDX4Q9NQI0 MTND4P12-201ENST00000498999 1377 ntBASIC2.83□□□□□ -1.96
DDX4Q9NQI0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
DDX4Q9NQI0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
DDX4Q9NQI0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.82□□□□□ -1.96
DDX4Q9NQI0 RNU6-1280P-201ENST00000365211 107 ntBASIC2.82□□□□□ -1.96
DDX4Q9NQI0 RNU5E-7P-201ENST00000365290 117 ntBASIC2.82□□□□□ -1.96
DDX4Q9NQI0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
DDX4Q9NQI0 RNU6-1009P-201ENST00000390996 107 ntBASIC2.82□□□□□ -1.96
DDX4Q9NQI0 AC023141.4-201ENST00000412031 328 ntBASIC2.82□□□□□ -1.96
DDX4Q9NQI0 AC007064.1-201ENST00000412238 351 ntBASIC2.82□□□□□ -1.96
DDX4Q9NQI0 SNAP23P1-201ENST00000433229 246 ntBASIC2.82□□□□□ -1.96
DDX4Q9NQI0 USP9YP8-201ENST00000441913 500 ntBASIC2.82□□□□□ -1.96
DDX4Q9NQI0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.82□□□□□ -1.96
DDX4Q9NQI0 AC008628.2-201ENST00000502605 298 ntBASIC2.82□□□□□ -1.96
DDX4Q9NQI0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.82□□□□□ -1.96
DDX4Q9NQI0 AL121821.2-201ENST00000556081 394 ntBASIC2.82□□□□□ -1.96
DDX4Q9NQI0 AC009163.5-201ENST00000575421 637 ntBASIC2.82□□□□□ -1.96
DDX4Q9NQI0 FAM157A-202ENST00000615155 405 ntBASIC2.82□□□□□ -1.96
DDX4Q9NQI0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
DDX4Q9NQI0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
DDX4Q9NQI0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
DDX4Q9NQI0 RNU6-37P-201ENST00000362692 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-1252P-201ENST00000363054 104 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-11P-201ENST00000364234 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU5E-4P-201ENST00000364931 120 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-25P-201ENST00000383873 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-1-201ENST00000383898 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-48P-201ENST00000384161 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-36P-201ENST00000384172 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-4P-201ENST00000384205 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-5P-201ENST00000384238 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-3P-201ENST00000384314 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-16P-201ENST00000384385 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-15P-201ENST00000384534 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-2-201ENST00000384627 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-29P-201ENST00000384637 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-9-201ENST00000384776 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-33P-201ENST00000384793 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-750P-201ENST00000390946 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RN7SKP192-201ENST00000411291 327 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 SNORD56-201ENST00000413522 71 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 BX276092.3-201ENST00000424182 230 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 UBE2V1P4-201ENST00000425374 344 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.81□□□□□ -1.96
DDX4Q9NQI0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.81□□□□□ -1.96
DDX4Q9NQI0 PPP1R2P5-201ENST00000457256 603 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 snoU109.2-201ENST00000459316 135 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 snoU13.15-201ENST00000459407 104 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 snoU13.26-201ENST00000459452 105 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 MRPS36P2-201ENST00000512569 299 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 AC025423.5-201ENST00000550230 219 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RNU6-6P-201ENST00000606623 107 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 AL138726.1-201ENST00000614873 333 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.81□□□□□ -1.96
DDX4Q9NQI0 RMST_7.1-201ENST00000621935 268 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.81□□□□□ -1.96
DDX4Q9NQI0 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
DDX4Q9NQI0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.8□□□□□ -1.96
DDX4Q9NQI0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
DDX4Q9NQI0 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.8□□□□□ -1.96
DDX4Q9NQI0 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 Y_RNA.135-201ENST00000363439 95 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 AL139396.1-201ENST00000421137 167 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.8□□□□□ -1.96
DDX4Q9NQI0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX4Q9NQI0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX4Q9NQI0 AC018634.1-201ENST00000437554 401 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 AL161651.1-201ENST00000440882 223 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 AC092001.1-201ENST00000453012 261 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 RN7SL499P-201ENST00000481141 276 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.8□□□□□ -1.96
DDX4Q9NQI0 AC116655.1-201ENST00000508324 901 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX4Q9NQI0 RNU6-875P-201ENST00000516488 106 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 RNU7-30P-201ENST00000516835 62 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.8□□□□□ -1.96
DDX4Q9NQI0 AC026464.5-201ENST00000562497 722 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 AC007151.1-201ENST00000572774 483 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 MIR4648-201ENST00000580107 72 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 MIR3942-201ENST00000585264 109 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 AC005261.5-201ENST00000596280 355 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 AC123912.5-201ENST00000605470 343 ntBASIC2.8□□□□□ -1.96
DDX4Q9NQI0 AC104260.1-201ENST00000616660 539 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms